Annotation Detail for TUBA1B
Basic Information Top
| Gene Symbol: | TUBA1B ( K-ALPHA-1 ) |
|---|---|
| Gene Full Name: | tubulin, alpha 1b |
| Band: | 12q13.12 |
| Quick Links | Entrez ID:10376; OMIM: 602530; Uniprot ID:TBA1B_HUMAN; ENSEMBL ID: ENSG00000123416; HGNC ID: 18809 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 40 | N6-acetyllysine (By similarity). | |
| 41 | Phosphothreonine. | |
| 48 | Phosphoserine. | |
| 232 | Phosphoserine. | |
| 272 | Phosphotyrosine. | |
| 334 | Phosphothreonine. | |
| 339 | Omega-N-methylarginine. | |
| 340 | Phosphoserine. | |
| 432 | Phosphotyrosine. | |
| 439 | Phosphoserine. | |
| 451 | Phosphotyrosine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 272 | Phosphotyrosine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 38 | Phosphoserine(ATM) | HMM predict |
| 82 | Phosphothreonine(PKC) | HMM predict |
| 94 | Phosphothreonine(CK2) | HMM predict |
| 165 | Phosphoserine(PKG) | HMM predict |
| 178 | O-linked | HMM predict |
| 179 | O-linked | HMM predict |
| 179 | O-linked | HMM predict |
| 224 | Phosphotyrosine(INSR) | HMM predict |
| 277 | O-linked | HMM predict |
| 337 | Phosphothreonine(PKC) | HMM predict |
| 380 | N-linked | HMM predict |
| 432 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_006082
- Location:chr12 47807832-47811570
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 47825332 | 47825509 | 177 | 13850 |
| Fos | K562 | GSE19551 | 47818604 | 47819171 | 567 | 7317 |
| RARA | MCF7 | GSE15244 | 47811870 | 47812294 | 424 | 512 |
| TAF | Hela | GSE8489 | 47811775 | 47812329 | 554 | 482 |
| TAF | k562 | GSE8489 | 47811702 | 47812674 | 972 | 618 |
| hScc1 | CdLS | GSE12603 | 47811453 | 47811870 | 417 | 91 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 47801058 | 47801724 | 666 | 6442 |
| TAFII | hES | GSE17917 | 47801206 | 47801511 | 305 | 6474 |
| VDR | GM10855-Unstim | GSE22484 | 47805530 | 47808291 | 2761 | 922 |
| VDR | GM10855-stim | GSE22484 | 47805735 | 47808190 | 2455 | 870 |
| VDR | GM10861-Unstim | GSE22484 | 47805385 | 47808382 | 2997 | 949 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 47808205 | 47808757 | 552 | 0 |
| CTCF | G2 | GSE9613 | 47809484 | 47811702 | 2218 | 0 |
| LIN9 | S | GSE7516 | 47810756 | 47811258 | 502 | 0 |
| PHF8 | HeLa | GSE20725 | 47810119 | 47812260 | 2141 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 47810862 | 47812235 | 1373 | 0 |
| Pol2 | GM12878 | GSE19551 | 47809732 | 47811860 | 2128 | 0 |
| RARA | MCF7 | GSE15244 | 47810046 | 47810756 | 710 | 0 |
| Rb | Growing | GSE19898 | 47810783 | 47811136 | 353 | 0 |
| Rb | Growing | GSE19898 | 47811149 | 47811333 | 184 | 0 |
| Rb | Quiescent | GSE19898 | 47810251 | 47811547 | 1296 | 0 |
| Rb | Senescent | GSE19898 | 47810244 | 47811263 | 1019 | 0 |
| Rb | shRbQuiescent | GSE19898 | 47810743 | 47811055 | 312 | 0 |
| Rb | shRbSenescence | GSE19898 | 47810335 | 47811108 | 773 | 0 |
| hScc1 | CdLS | GSE12603 | 47810290 | 47811050 | 760 | 0 |
| hScc1 | G2 | GSE9613 | 47809451 | 47809805 | 354 | 0 |
| p130 | Quiescent | GSE19898 | 47810326 | 47811074 | 748 | 0 |
| p130 | Senescent | GSE19898 | 47810333 | 47811325 | 992 | 0 |
| p130 | shRbQuiescent | GSE19898 | 47810353 | 47811479 | 1126 | 0 |
| p130 | shRbSenescent | GSE19898 | 47810128 | 47811416 | 1288 | 0 |
Validated miRNA targets