AutismKB 2.0

Annotation Detail for IRF9


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Basic Information Top
Gene Symbol:IRF9 ( IRF-9,ISGF3,ISGF3G,p48 )
Gene Full Name: interferon regulatory factor 9
Band: 14q12
Quick LinksEntrez ID:10379; OMIM: 147574; Uniprot ID:IRF9_HUMAN; ENSEMBL ID: ENSG00000213928; HGNC ID: 6131
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006084
  • Location:chr14 23700261-23705611
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 23700031 23700447 416 23
CTCF CD4SISSRdata 23700031 23700447 416 23
CTCF JurkatGSE12889 23699955 23700415 460 77
CTCF G2GSE9613 23699985 23700381 396 79
USF1 HepG2E 23698663 23701462 2799 199
USF2 HepG2E 23698663 23701462 2799 199
hScc1 CdLSGSE12603 23699985 23700460 475 39
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me2 HCT116GSE10453 23700744 23701247 503 0
H3ac HepG2E 23700419 23701462 1043 0
Myc K562GSE19551 23700009 23700540 531 0
P300 T30-glioblastomaGSE21026 23699895 23700628 733 0
PHF8 Hs68plusFBSGSE20725 23699821 23701010 1189 0
RARA MCF7GSE15244 23699801 23701462 1661 0
RARG MCF7GSE15244 23700021 23701119 1098 0
USF1 HepG2E 23702993 23703476 483 0
VDR GM10861-UnstimGSE22484 23699012 23701741 2729 0
VDR GM10861-stimGSE22484 23698667 23707433 8766 0
hScc1 BcellGSE12603 23700021 23700566 545 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-122 hsa-mir-122 18 20592082
hsa-miR-122* hsa-mir-122 18 20592082
hsa-miR-342-3p hsa-mir-342 14 19151778
hsa-miR-342-5p hsa-mir-342 14 19151778
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018