AutismKB 2.0

Annotation Detail for NOD1


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Basic Information Top
Gene Symbol:NOD1 ( CARD4,CLR7.1,NLRC1 )
Gene Full Name: nucleotide-binding oligomerization domain containing 1
Band: 7p14.3
Quick LinksEntrez ID:10392; OMIM: 605980; Uniprot ID:NOD1_HUMAN; ENSEMBL ID: ENSG00000106100; HGNC ID: 16390
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
51Phosphoserine(CK2)HMM predict
159Phosphotyrosine(Syk)HMM predict
448Phosphoserine(CDK)HMM predict
448Phosphoserine(CDC2)HMM predict
555O-linkedHMM predict
555Phosphothreonine(PKC)HMM predict
556O-linkedHMM predict
557O-linkedHMM predict
660Phosphotyrosine(Syk)HMM predict
718Phosphotyrosine(INSR)HMM predict
887Phosphoserine(PKG)HMM predict
887Phosphoserine(IKK)HMM predict
895N-linkedHMM predict
897Phosphothreonine(PKC)HMM predict
944Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006092
  • Location:chr7 30430674-30484789
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 30484663 30484954 291 19
PHF8 HeLaGSE20725 30484157 30485627 1470 103
p130 SenescentGSE19898 30485059 30485321 262 401
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 30419271 30419456 185 11311
CTCF CD4SISSRdata 30419271 30419456 185 11311
CTCF G2GSE9613 30419156 30419594 438 11300
ER E2-MCF7GSE14664 30413822 30413856 34 16836
Nanog hESGSE18292 30419153 30419505 352 11346
Sox2 hESGSE18292 30419137 30419519 382 11347
TAFII hESGSE17917 30419280 30419523 243 11273
hScc1 BcellGSE12603 30418901 30419737 836 11356
hScc1 CdLSGSE12603 30419156 30419737 581 11228
hScc1 G2GSE9613 30418901 30419628 727 11410
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 30452055 30452346 291 0
CTCF CD4SISSRdata 30452055 30452346 291 0
CTCF G2GSE9613 30433626 30433943 317 0
CTCF G2GSE9613 30436974 30437377 403 0
CTCF G2GSE9613 30442477 30442807 330 0
CTCF G2GSE9613 30458045 30459548 1503 0
CTCF G2GSE9613 30460374 30460632 258 0
CTCF G2GSE9613 30475623 30475797 174 0
CTCF G2GSE9613 30479197 30479526 329 0
ER E2-MCF7GSE14664 30457619 30457661 42 0
ER Fulvestrant-MCF7GSE14664 30457623 30457666 43 0
Fos K562GSE19551 30476188 30476873 685 0
Nanog hESGSE18292 30456375 30456751 376 0
Oct1 H2O2-HelaGSE14283 30475305 30475333 28 0
Oct1 HelaGSE14283 30457072 30457117 45 0
Oct1 HelaGSE14283 30457627 30457661 34 0
P300 T30-glioblastomaGSE21026 30439028 30439512 484 0
RARA MCF7GSE15244 30439203 30439482 279 0
Rb GrowingGSE19898 30465944 30466083 139 0
Rb SenescentGSE19898 30465788 30466247 459 0
TAF HelaGSE8489 30473491 30473790 299 0
TFAP2C MCF7GSE21234 30433831 30434414 583 0
hScc1 BcellGSE12603 30452169 30452494 325 0
hScc1 CdLSGSE12603 30452169 30452418 249 0
p130 QuiescentGSE19898 30477176 30477318 142 0
p130 SenescentGSE19898 30484439 30484883 444 0
p130 shRbSenescentGSE19898 30475398 30475888 490 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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