AutismKB 2.0

Annotation Detail for RAPGEF3


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Basic Information Top
Gene Symbol:RAPGEF3 ( CAMP-GEFI,EPAC,EPAC1,HSU79275,MGC21410,bcm910 )
Gene Full Name: Rap guanine nucleotide exchange factor (GEF) 3
Band: 12q13.11
Quick LinksEntrez ID:10411; OMIM: 606057; Uniprot ID:A8K2G5_HUMAN; ENSEMBL ID: ENSG00000079337; HGNC ID: 16629
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006105
  • Location:chr12 46417293-46438821
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 46438900 46439796 896 527
CTCF G2GSE9613 46443389 46443743 354 4745
NRSF pAbJurkat 46438900 46439396 496 327
Oct1 H2O2-HelaGSE14283 46439326 46439365 39 524
Oct1 HelaGSE14283 46439328 46439365 37 525
Rb QuiescentGSE19898 46439237 46439379 142 487
Rb SenescentGSE19898 46439102 46439613 511 536
TFAP2C MCF7GSE21234 46445447 46446115 668 6960
hScc1 CdLSGSE12603 46439426 46439796 370 790
hScc1 G2GSE9613 46438900 46439648 748 453
p130 QuiescentGSE19898 46439108 46439454 346 460
p130 shRbQuiescentGSE19898 46439162 46439620 458 570
p130 shRbSenescentGSE19898 46439008 46439522 514 444
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 46412978 46413351 373 4129
CTCF G2GSE9613 46415511 46415995 484 1541
p130 SenescentGSE19898 46416985 46417345 360 129
p130 shRbSenescentGSE19898 46414874 46415235 361 2239
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 46417010 46417685 675 0
CTCF G2GSE9613 46418094 46418645 551 0
CTCF G2GSE9613 46419663 46421088 1425 0
CTCF G2GSE9613 46421607 46422632 1025 0
CTCF G2GSE9613 46423409 46424957 1548 0
CTCF G2GSE9613 46425189 46426101 912 0
CTCF G2GSE9613 46427736 46428264 528 0
CTCF G2GSE9613 46428932 46430145 1213 0
CTCF G2GSE9613 46431214 46432029 815 0
CTCF G2GSE9613 46435993 46436349 356 0
CTCF G2GSE9613 46437528 46438413 885 0
GATA3 MCF7GSE15244 46433619 46433942 323 0
P300 T0-glioblastomaGSE21026 46433396 46434012 616 0
RARA MCF7GSE15244 46433619 46433942 323 0
RARA MCF7GSE15244 46434754 46435128 374 0
RARG MCF7GSE15244 46432788 46433032 244 0
RARG MCF7GSE15244 46433619 46433942 323 0
RARG MCF7GSE15244 46434754 46434950 196 0
TFAP2C MCF7GSE21234 46434147 46434678 531 0
TFAP2C MCF7GSE21234 46434694 46435458 764 0
hScc1 BcellGSE12603 46422052 46422632 580 0
hScc1 BcellGSE12603 46429109 46429530 421 0
hScc1 CdLSGSE12603 46422192 46422632 440 0
hScc1 G2GSE9613 46422157 46422632 475 0
hScc1 G2GSE9613 46423724 46424935 1211 0
hScc1 G2GSE9613 46427771 46428195 424 0
p130 QuiescentGSE19898 46417252 46417551 299 0
p130 SenescentGSE19898 46417659 46417870 211 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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