Annotation Detail for SEC23B
Basic Information Top
| Gene Symbol: | SEC23B ( CDA-II,CDAII,CDAN2,HEMPAS ) |
|---|---|
| Gene Full Name: | Sec23 homolog B (S. cerevisiae) |
| Band: | 20p11.23 |
| Quick Links | Entrez ID:10483; OMIM: 224100,610512; Uniprot ID:SC23B_HUMAN; ENSEMBL ID: ENSG00000101310; HGNC ID: 10702 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 320 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 43 | Phosphothreonine(CDK) | HMM predict |
| 43 | Phosphothreonine(MAPK) | HMM predict |
| 228 | Phosphoserine(CDK) | HMM predict |
| 241 | N-linked | HMM predict |
| 266 | Phosphothreonine(PKA) | HMM predict |
| 338 | N-linked | HMM predict |
| 343 | N-linked | HMM predict |
| 367 | N-linked | HMM predict |
| 372 | Phosphotyrosine(INSR) | HMM predict |
| 380 | N-linked | HMM predict |
| 492 | Phosphothreonine(PKC) | HMM predict |
| 499 | Phosphothreonine(PKA) | HMM predict |
| 569 | Phosphoserine(IKK) | HMM predict |
| 577 | Phosphoserine(CK1) | HMM predict |
| 596 | N-linked | HMM predict |
| 597 | N-linked | HMM predict |
| 598 | Phosphoserine(CDC2) | HMM predict |
| 602 | Phosphoserine(PKA) | HMM predict |
| 603 | Phosphoserine(CK1) | HMM predict |
| 605 | Phosphotyrosine(EGFR) | HMM predict |
| 674 | Phosphotyrosine(EGFR) | HMM predict |
| 674 | Phosphotyrosine(Syk) | HMM predict |
| 725 | N-linked | HMM predict |
| 727 | Phosphoserine(ATM) | HMM predict |
| 731 | N-linked | HMM predict |
- RefSeq ID: NM_006363
- Location:chr20 18436187-18490049
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 18435916 | 18436276 | 360 | 92 |
| LIN54 | S | GSE7516 | 18435842 | 18436125 | 283 | 204 |
| P300 | T30-glioblastoma | GSE21026 | 18435354 | 18437001 | 1647 | 10 |
| hScc1 | Bcell | GSE12603 | 18435879 | 18436167 | 288 | 165 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 18495432 | 18496679 | 1247 | 6006 |
| GABP | Hela | GSE8489 | 18495244 | 18496654 | 1410 | 5900 |
| GABP | k562 | GSE8489 | 18495244 | 18496654 | 1410 | 5900 |
| H3ac | HepG2 | E | 18495244 | 18496654 | 1410 | 5900 |
| Nanog | ES | GSE20650 | 18495762 | 18496235 | 473 | 5949 |
| PHF8 | 293T | GSE20725 | 18495375 | 18496534 | 1159 | 5905 |
| PHF8 | HeLa | GSE20725 | 18495622 | 18496572 | 950 | 6048 |
| PHF8 | Hs68minusFBS | GSE20725 | 18495346 | 18496654 | 1308 | 5951 |
| PHF8 | Hs68plusFBS | GSE20725 | 18495155 | 18496651 | 1496 | 5854 |
| Rb | Senescent | GSE19898 | 18496018 | 18496362 | 344 | 6141 |
| TAFII | hES | GSE17917 | 18495714 | 18496263 | 549 | 5939 |
| USF1 | HepG2 | E | 18495244 | 18496654 | 1410 | 5900 |
| USF2 | HepG2 | E | 18495244 | 18496654 | 1410 | 5900 |
| hScc1 | Bcell | GSE12603 | 18495877 | 18496128 | 251 | 5953 |
| p130 | Quiescent | GSE19898 | 18495822 | 18496450 | 628 | 6087 |
| p130 | shRbQuiescent | GSE19898 | 18495984 | 18496390 | 406 | 6138 |
| p130 | shRbSenescent | GSE19898 | 18495736 | 18496293 | 557 | 5965 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 18435762 | 18436912 | 1150 | 0 |
| Fos | K562 | GSE19551 | 18435767 | 18436856 | 1089 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 18437005 | 18437332 | 327 | 0 |
| H3K4me3 | colorectal | cancer | 18436706 | 18437332 | 626 | 0 |
| H3ac | HepG2 | E | 18435842 | 18437332 | 1490 | 0 |
| H3ac | HepG2 | E | 18437679 | 18438217 | 538 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 18435669 | 18436964 | 1295 | 0 |
| PHF8 | 293T | GSE20725 | 18435629 | 18437210 | 1581 | 0 |
| PHF8 | HeLa | GSE20725 | 18435789 | 18437110 | 1321 | 0 |
| TAF | Hela | GSE8489 | 18436746 | 18437332 | 586 | 0 |
Validated miRNA targets