AutismKB 2.0

Annotation Detail for C1orf61


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Basic Information Top
Gene Symbol:C1orf61 ( CROC4,FLJ38303 )
Gene Full Name: chromosome 1 open reading frame 61
Band: 1q22
Quick LinksEntrez ID:10485; OMIM: NA; Uniprot ID:CROC4_HUMAN; ENSEMBL ID: ENSG00000125462; HGNC ID: 30780
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006365
  • Location:chr1 154640678-154665807
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 154682302 154682627 325 16657
CTCF CD4SISSRdata 154682302 154682627 325 16657
CTCF G2GSE9613 154680816 154681035 219 15118
CTCF G2GSE9613 154682206 154682599 393 16595
H3K27me3 colorectalcancer 154667893 154671630 3737 3954
Nanog hESGSE18292 154676202 154676668 466 10628
Oct1 H2O2-HelaGSE14283 154680423 154680452 29 14630
Oct1 H2O2-HelaGSE14283 154682460 154682493 33 16669
Oct1 HelaGSE14283 154668111 154668144 33 2320
Oct1 HelaGSE14283 154672564 154672604 40 6777
Rb GrowingGSE19898 154682383 154682505 122 16637
SRF HepG2GSE8489 154671525 154671966 441 5938
hScc1 BcellGSE12603 154671464 154672108 644 5979
hScc1 BcellGSE12603 154672508 154672880 372 6887
hScc1 BcellGSE12603 154680651 154681175 524 15106
hScc1 BcellGSE12603 154682206 154682804 598 16698
hScc1 CdLSGSE12603 154680651 154681139 488 15088
hScc1 CdLSGSE12603 154682206 154682804 598 16698
hScc1 G2GSE9613 154680651 154681212 561 15124
hScc1 G2GSE9613 154682206 154682564 358 16578
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 154634959 154635283 324 5558
CTCF G2GSE9613 154636671 154637680 1009 3503
ER MCF7GSE19013 154636530 154636963 433 3932
Fos K562GSE19551 154634833 154635201 368 5662
Oct1 HelaGSE14283 154638586 154638640 54 2066
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 154656342 154656617 275 0
CTCF G2GSE9613 154657099 154657612 513 0
ER E2-MCF7GSE14664 154645386 154645418 32 0
ER E2-MCF7GSE14664 154664717 154664818 101 0
Fos K562GSE19551 154657944 154658506 562 0
H3K27me3 colorectalcancer 154660850 154661844 994 0
H3K27me3 colorectalcancer 154662092 154667006 4914 0
NRSF JurkatGSE13047 154650808 154651422 614 0
NRSF mAbJurkat 154648368 154649129 761 0
NRSF mAbJurkat 154650312 154654549 4237 0
NRSF-mono JurkatQuESTdata 154650694 154651321 627 0
NRSF-poly JurkatQuESTdata 154650711 154651422 711 0
Nanog hESGSE18292 154658612 154658857 245 0
Oct1 HelaGSE14283 154645387 154645418 31 0
Oct1 HelaGSE14283 154654994 154655024 30 0
hScc1 BcellGSE12603 154656444 154657407 963 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-9 hsa-mir-9-1 1 19289835
hsa-miR-9 hsa-mir-9-2 5 19289835
hsa-miR-9 hsa-mir-9-3 15 19289835
hsa-miR-9* hsa-mir-9-1 1 19289835
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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