AutismKB 2.0

Annotation Detail for LRRC41


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Basic Information Top
Gene Symbol:LRRC41 ( MGC126571,MGC126573,MUF1,RP4-636H5.2 )
Gene Full Name: leucine rich repeat containing 41
Band: 1p34.1-p33
Quick LinksEntrez ID:10489; OMIM: NA; Uniprot ID:LRC41_HUMAN; ENSEMBL ID: ENSG00000132128; HGNC ID: 16917
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
276Phosphoserine.
327Phosphothreonine.
357Phosphoserine.
Location(AA) Modifications Resource
254Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
14Phosphoserine(IKK)HMM predict
16O-linkedHMM predict
95O-linkedHMM predict
95Phosphoserine(IKK)HMM predict
254PhosphoserineHMM predict
286Phosphoserine(IKK)HMM predict
286Phosphoserine(PKG)HMM predict
301Phosphothreonine(PKC)HMM predict
301O-linkedHMM predict
305Phosphothreonine(PKC)HMM predict
305Phosphothreonine(PKA)HMM predict
326O-linkedHMM predict
332Phosphothreonine(PKC)HMM predict
335Phosphoserine(CDK)HMM predict
335Phosphoserine(CDC2)HMM predict
335O-linkedHMM predict
337O-linkedHMM predict
337Phosphoserine(PKA)HMM predict
337O-linkedHMM predict
342O-linkedHMM predict
342Phosphothreonine(PKC)HMM predict
342O-linkedHMM predict
343Phosphoserine(IKK)HMM predict
344Phosphoserine(IKK)HMM predict
346O-linkedHMM predict
347Phosphoserine(CK1)HMM predict
349O-linkedHMM predict
350Phosphoserine(CDC2)HMM predict
351Phosphoserine(PKC)HMM predict
351O-linkedHMM predict
359O-linkedHMM predict
493Phosphoserine(PKG)HMM predict
647N-linkedHMM predict
679N-linkedHMM predict
705Phosphoserine(CK1)HMM predict
710Phosphoserine(CK1)HMM predict
821Phosphotyrosine(Jak)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006369
  • Location:chr1 46516659-46541624
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 46539861 46541537 1676 0
H3ac HepG2E 46538615 46540172 1557 0
Myc K562GSE19551 46524190 46524724 534 0
Myc hESGSE17917 46541428 46541695 267 0
Oct1 H2O2-HelaGSE14283 46536883 46536914 31 0
PHF8 HeLaGSE20725 46539564 46542250 2686 0
PHF8 Hs68minusFBSGSE20725 46539834 46542331 2497 0
TAF k562GSE8489 46538615 46539661 1046 0
hScc1 BcellGSE12603 46539549 46541537 1988 0
hScc1 CdLSGSE12603 46540063 46540888 825 0
p130 shRbQuiescentGSE19898 46540584 46541095 511 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
731 mRNA RAD54L chr1 46425436 46456165 73 mRNA LRRC41 chr1 46456092 46481295Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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