Annotation Detail for SEMA6C
Basic Information Top
| Gene Symbol: | SEMA6C ( SEMAY,m-SemaY,m-SemaY2 ) |
|---|---|
| Gene Full Name: | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C |
| Band: | 1q21.3 |
| Quick Links | Entrez ID:10500; OMIM: 609294; Uniprot ID:SEM6C_HUMAN; ENSEMBL ID: ENSG00000143434; HGNC ID: 10740 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 70 | N-linked (GlcNAc...) (Potential). | |
| 286 | N-linked (GlcNAc...) (Potential). | |
| 437 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 70 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 286 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 437 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 70 | N-linked | HMM predict |
| 286 | N-linked | HMM predict |
| 325 | Phosphoserine(IKK) | HMM predict |
| 358 | Phosphothreonine(MAPK) | HMM predict |
| 367 | Phosphoserine(CDC2) | HMM predict |
| 367 | Phosphoserine(CDK) | HMM predict |
| 367 | O-linked | HMM predict |
| 372 | Phosphoserine(IKK) | HMM predict |
| 437 | N-linked | HMM predict |
| 487 | Phosphothreonine(PKC) | HMM predict |
| 577 | Phosphoserine(ATM) | HMM predict |
| 577 | Phosphoserine(IKK) | HMM predict |
| 600 | Phosphoserine(ATM) | HMM predict |
| 600 | Phosphoserine(IKK) | HMM predict |
| 668 | O-linked | HMM predict |
| 681 | O-linked | HMM predict |
| 682 | O-linked | HMM predict |
| 700 | Phosphothreonine(MAPK) | HMM predict |
| 700 | Phosphothreonine(CDK) | HMM predict |
| 700 | O-linked | HMM predict |
| 736 | Methylarginine | HMM predict |
| 791 | Phosphothreonine(PKC) | HMM predict |
| 792 | O-linked | HMM predict |
| 792 | O-linked | HMM predict |
| 808 | Phosphoserine(CDC2) | HMM predict |
| 808 | O-linked | HMM predict |
| 830 | Phosphoserine(PKA) | HMM predict |
| 855 | O-linked | HMM predict |
| 855 | Phosphoserine(CDK) | HMM predict |
| 893 | Methylarginine | HMM predict |
| 917 | O-linked | HMM predict |
| 928 | Phenylalanine | HMM predict |
| 929 | Phenylalanine | HMM predict |
| 930 | Phenylalanine | HMM predict |
- RefSeq ID: NM_030913
- Location:chr1 149370788-149385727
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 149385793 | 149386130 | 337 | 234 |
| H3ac | HepG2 | E | 149386355 | 149387016 | 661 | 958 |
| P300 | T30-glioblastoma | GSE21026 | 149385508 | 149386460 | 952 | 257 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 149365016 | 149365591 | 575 | 5485 |
| Myc | hES | GSE17917 | 149370376 | 149370724 | 348 | 239 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 149372057 | 149372965 | 908 | 0 |
| CTCF | G2 | GSE9613 | 149374229 | 149374488 | 259 | 0 |
| hScc1 | Bcell | GSE12603 | 149372413 | 149372892 | 479 | 0 |
| hScc1 | Bcell | GSE12603 | 149374229 | 149374528 | 299 | 0 |
| hScc1 | Bcell | GSE12603 | 149385217 | 149385941 | 724 | 0 |
Validated miRNA targets