AutismKB 2.0

Annotation Detail for CHERP


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Basic Information Top
Gene Symbol:CHERP ( DAN16,SCAF6,SRA1 )
Gene Full Name: calcium homeostasis endoplasmic reticulum protein
Band: 19p13.11
Quick LinksEntrez ID:10523; OMIM: NA; Uniprot ID:CHERP_HUMAN; ENSEMBL ID: ENSG00000085872; HGNC ID: 16930
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1N-acetylmethionine.
18N6-acetyllysine.
714Phosphotyrosine (By similarity).
813Phosphoserine.
815Phosphoserine.
817Phosphoserine.
819Phosphothreonine.
822Phosphoserine.
823Phosphoserine.
828Phosphoserine.
830Phosphoserine.
879N6-acetyllysine.
901N6-acetyllysine.
904Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006387
  • Location:chr19 16489705-16514247
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 293TGSE20725 16513597 16515044 1447 73
PHF8 HeLaGSE20725 16513504 16515045 1541 27
PHF8 Hs68plusFBSGSE20725 16513547 16515024 1477 38
TAF k562GSE8489 16514706 16515018 312 615
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 16500036 16500178 142 0
CTCF CD4SISSRdata 16500036 16500178 142 0
CTCF JurkatGSE12889 16500030 16500219 189 0
CTCF G2GSE9613 16495155 16495313 158 0
CTCF G2GSE9613 16499665 16500277 612 0
CTCF G2GSE9613 16503353 16503604 251 0
CTCF G2GSE9613 16504000 16504225 225 0
ETS1 JurkatGSE17954 16513545 16514845 1300 0
GABP k562GSE8489 16512816 16513883 1067 0
H3K4me2 HCT116GSE10453 16512816 16513590 774 0
H3K4me3 colorectalcancer 16512816 16513622 806 0
H3ac HepG2E 16512816 16513827 1011 0
Oct1 HelaGSE14283 16514187 16514263 76 0
Rb GrowingGSE19898 16499063 16499226 163 0
hScc1 BcellGSE12603 16496666 16497410 744 0
hScc1 BcellGSE12603 16499875 16500277 402 0
hScc1 BcellGSE12603 16507756 16507900 144 0
hScc1 BcellGSE12603 16513755 16514402 647 0
hScc1 CdLSGSE12603 16499875 16500277 402 0
p130 QuiescentGSE19898 16490726 16490996 270 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
12852 mRNA FLJ21742 chr19 16468223 16493160 348 mRNA CHERP chr19 16489705 16514248Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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