AutismKB 2.0

Annotation Detail for ANP32B


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Basic Information Top
Gene Symbol:ANP32B ( APRIL,PHAPI2,SSP29 )
Gene Full Name: acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
Band: 9q22.33
Quick LinksEntrez ID:10541; OMIM: NA; Uniprot ID:AN32B_HUMAN; ENSEMBL ID: ENSG00000136938; HGNC ID: 16677
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
86N6-acetyllysine.
244Phosphothreonine.
Location(AA) Modifications Resource
244Phosphothreonine.Swiss-Prot 53.0
244PhosphothreoninePhospho.ELM 6.0
Location(AA) Modification Resource
13N-linkedHMM predict
15Phosphothreonine(PKA)HMM predict
72Phosphoserine(CK1)HMM predict
89N-linkedHMM predict
94N-linkedHMM predict
131Phosphotyrosine(EGFR)HMM predict
148Phosphotyrosine(INSR)HMM predict
158Phosphoserine(CK2)HMM predict
210PhosphoserineHMM predict
210Phosphoserine(CK2)HMM predict
210Phosphoserine(CK1)HMM predict
244Phosphothreonine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006401
  • Location:chr9 99785463-99818041
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 99785166 99785501 335 130
CTCF CD4SISSRdata 99785166 99785501 335 130
ER Fulvestrant-MCF7GSE14664 99780203 99780252 49 5236
Oct1 H2O2-HelaGSE14283 99766587 99766616 29 18862
Oct1 HelaGSE14283 99766545 99766613 68 18885
Oct1 HelaGSE14283 99780198 99780243 45 5243
TAF k562GSE8489 99782971 99784591 1620 1683
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 99837416 99838428 1012 19881
CTCF CD4GSE12889 99836847 99837123 276 18944
CTCF CD4SISSRdata 99836847 99837123 276 18944
CTCF JurkatGSE12889 99836868 99837177 309 18981
FoxA1 MCF7MACSdata 99826895 99827066 171 8939
Myc K562GSE19551 99836792 99837282 490 18996
Oct4 hESGSE17917 99836899 99837155 256 18986
P300 T30-glioblastomaGSE21026 99837479 99838350 871 19873
TAFII hESGSE17917 99836864 99837130 266 18956
hScc1 BcellGSE12603 99822629 99823170 541 4858
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Fulvestrant-MCF7GSE14664 99796910 99796959 49 0
Oct1 H2O2-HelaGSE14283 99789788 99789830 42 0
Oct1 HelaGSE14283 99788673 99788739 66 0
Oct1 HelaGSE14283 99789791 99789829 38 0
Oct1 HelaGSE14283 99790449 99790477 28 0
Oct1 HelaGSE14283 99815902 99815931 29 0
Rb QuiescentGSE19898 99786326 99786735 409 0
Rb SenescentGSE19898 99786345 99786531 186 0
TAF k562GSE8489 99787586 99787878 292 0
TAF k562GSE8489 99788380 99789580 1200 0
TFAP2C MCF7GSE21234 99787080 99787635 555 0
hScc1 BcellGSE12603 99784942 99786456 1514 0
p130 QuiescentGSE19898 99786207 99786664 457 0
p130 SenescentGSE19898 99786327 99786573 246 0
p130 shRbQuiescentGSE19898 99786344 99786632 288 0
p130 shRbSenescentGSE19898 99786349 99786609 260 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-15a hsa-mir-15a 13 21205967
hsa-miR-15a* hsa-mir-15a 13 21205967
hsa-miR-16 hsa-mir-16-1 13 21205967
hsa-miR-16 hsa-mir-16-2 3 21205967
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
hsa-miR-34a hsa-mir-34a 1 21205967
hsa-miR-34a* hsa-mir-34a 1 21205967
hsa-miR-34b hsa-mir-34b 11 21205967
hsa-miR-34b* hsa-mir-34b 11 21205967
hsa-miR-34c-3p hsa-mir-34c 11 21205967
hsa-miR-34c-5p hsa-mir-34c 11 21205967
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
1126 Unknown pSILAC miR-1 ANP32B down 50-25% 18668040
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000136938 n_a n_a n_a "epithelium, squamous cell, lymphocyte, muscle cell" "benign tumour, malignant tumour, carcinoma, non-Hodgkin's, sarcoma"
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
26803 mRNA ANP32B chr9 97825197 97857776 1106 EST chr9 97828387 97829493 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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