AutismKB 2.0

Annotation Detail for SLC35A1


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Basic Information Top
Gene Symbol:SLC35A1 ( CDG2F,CMPST,CST,FLJ76955,hCST )
Gene Full Name: solute carrier family 35 (CMP-sialic acid transporter), member A1
Band: 6q15
Quick LinksEntrez ID:10559; OMIM: 605634; Uniprot ID:S35A1_HUMAN; ENSEMBL ID: ENSG00000164414; HGNC ID: 11021
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
84Phosphoserine(CDC2)HMM predict
137N-linkedHMM predict
141Phosphoserine(CK1)HMM predict
228Phosphoserine(ATM)HMM predict
242SulfotyrosineHMM predict
320Phosphothreonine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006416
  • Location:chr6 88239413-88278765
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 88238631 88240183 1552 7
P300 T30-glioblastomaGSE21026 88238743 88239916 1173 84
TFAP2C MCF7GSE21234 88238923 88239590 667 157
p130 SenescentGSE19898 88238848 88239385 537 297
p130 shRbQuiescentGSE19898 88239008 88239447 439 186
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 88239512 88240013 501 0
ER MCF7E 88257148 88257498 350 0
H3K4me3 colorectalcancer 88239978 88240198 220 0
Oct1 HelaGSE14283 88263332 88263362 30 0
PHF8 293TGSE20725 88238747 88240183 1436 0
PHF8 HeLaGSE20725 88238993 88240304 1311 0
hScc1 BcellGSE12603 88239457 88239869 412 0
hScc1 G2GSE9613 88239547 88240013 466 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-15a hsa-mir-15a 13 18362358
hsa-miR-15a hsa-mir-15a 13 18362358
hsa-miR-15a* hsa-mir-15a 13 18362358
hsa-miR-15a* hsa-mir-15a 13 18362358
hsa-miR-16 hsa-mir-16-1 13 18362358
hsa-miR-16 hsa-mir-16-2 3 18362358
hsa-miR-16 hsa-mir-16-1 13 18362358
hsa-miR-16 hsa-mir-16-2 3 18362358
hsa-miR-16-1* hsa-mir-16-1 13 18362358
hsa-miR-16-1* hsa-mir-16-1 13 18362358
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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