Annotation Detail for POMT1
Basic Information Top
| Gene Symbol: | POMT1 ( FLJ37239,LGMD2K,RT ) |
|---|---|
| Gene Full Name: | protein-O-mannosyltransferase 1 |
| Band: | 9q34.13 |
| Quick Links | Entrez ID:10585; OMIM: 607423; Uniprot ID:POMT1_HUMAN; ENSEMBL ID: ENSG00000130714; HGNC ID: 9202 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 435 | N-linked (GlcNAc...) (Potential). | |
| 471 | N-linked (GlcNAc...). | |
| 539 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 435 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 471 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 539 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 46 | Phosphotyrosine(Syk) | HMM predict |
| 47 | Sulfotyrosine | HMM predict |
| 64 | Phosphoserine(ATM) | HMM predict |
| 183 | Phosphoserine(CK1) | HMM predict |
| 260 | S-palmitoyl | HMM predict |
| 328 | Phosphothreonine(PKC) | HMM predict |
| 390 | Phosphoserine(CDC2) | HMM predict |
| 408 | Phosphothreonine(PKC) | HMM predict |
| 422 | Phosphoserine(MAPK) | HMM predict |
| 425 | Phosphoserine(ATM) | HMM predict |
| 515 | Phosphotyrosine(SRC) | HMM predict |
| 515 | Phosphotyrosine(Abl) | HMM predict |
| 518 | Phosphoserine(ATM) | HMM predict |
| 541 | Phosphoserine(PKA) | HMM predict |
| 565 | Phosphotyrosine(SRC) | HMM predict |
| 715 | Phosphothreonine(PKC) | HMM predict |
- RefSeq ID: NM_001077365
- Location:chr9 133368109-133389012
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 133350565 | 133350892 | 327 | 17381 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 133368639 | 133369918 | 1279 | 0 |
| GABP | k562 | GSE8489 | 133380726 | 133381684 | 958 | 0 |
| H3ac | HepG2 | E | 133368778 | 133369918 | 1140 | 0 |
| PHF8 | HeLa | GSE20725 | 133367663 | 133368938 | 1275 | 0 |
| SRF | k562 | GSE8489 | 133380686 | 133381858 | 1172 | 0 |
| TAF | Hela | GSE8489 | 133369487 | 133369918 | 431 | 0 |
| hScc1 | Bcell | GSE12603 | 133379073 | 133379816 | 743 | 0 |
| hScc1 | Bcell | GSE12603 | 133380805 | 133381551 | 746 | 0 |
| hScc1 | Bcell | GSE12603 | 133387236 | 133387483 | 247 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27133 | mRNA | POMT1 | chr9 | 131407865 | 131428746 | 57 | EST | chr9 | 131421498 | 131427170 | Sense/Antisense (SA) pairs | |