Annotation Detail for STAMBP
Basic Information Top
| Gene Symbol: | STAMBP ( AMSH,MGC126516,MGC126518 ) |
|---|---|
| Gene Full Name: | STAM binding protein |
| Band: | 2p13.1 |
| Quick Links | Entrez ID:10617; OMIM: 606247; Uniprot ID:STABP_HUMAN; ENSEMBL ID: ENSG00000124356; HGNC ID: 16950 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | Phosphoserine. | |
| 48 | Phosphoserine. | |
| 243 | Phosphoserine. | |
| 245 | Phosphoserine. | |
| 247 | Phosphoserine. | |
| 348 | JAMM motif. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 2 | Phosphoserine. | Swiss-Prot 53.0 |
| 2 | Phosphoserine | Phospho.ELM 6.0 |
| 48 | Phosphoserine. | Swiss-Prot 53.0 |
| 48 | Phosphoserine | Phospho.ELM 6.0 |
| 243 | Phosphoserine. | Swiss-Prot 53.0 |
| 243 | Phosphoserine | Phospho.ELM 6.0 |
| 245 | Phosphoserine. | Swiss-Prot 53.0 |
| 245 | Phosphoserine | Phospho.ELM 6.0 |
| 247 | Phosphoserine. | Swiss-Prot 53.0 |
| 247 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 51 | Phosphoserine(CK1) | HMM predict |
| 91 | Phosphothreonine(PKC) | HMM predict |
| 121 | Phosphotyrosine(Syk) | HMM predict |
| 121 | Sulfotyrosine | HMM predict |
| 215 | O-linked | HMM predict |
| 243 | Phosphoserine(PKG) | HMM predict |
| 247 | Phosphoserine(CK1) | HMM predict |
| 355 | Sulfotyrosine | HMM predict |
| 409 | Serine | HMM predict |
- RefSeq ID: NM_201647
- Location:chr2 73909593-73943517
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 73904614 | 73904945 | 331 | 4814 |
| CTCF | CD4 | SISSRdata | 73904614 | 73904945 | 331 | 4814 |
| CTCF | G2 | GSE9613 | 73904344 | 73905080 | 736 | 4882 |
| ETS1 | Jurkat | GSE17954 | 73908847 | 73910335 | 1488 | 3 |
| Fos | K562 | GSE19551 | 73909130 | 73909801 | 671 | 128 |
| GABP | k562 | GSE8489 | 73907657 | 73909429 | 1772 | 1051 |
| Oct1 | Hela | GSE14283 | 73906525 | 73906560 | 35 | 3051 |
| P300 | T0-glioblastoma | GSE21026 | 73908786 | 73909832 | 1046 | 285 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 73898026 | 73898144 | 118 | 11509 |
| TAF | Hela | GSE8489 | 73898991 | 73899182 | 191 | 10507 |
| hScc1 | Bcell | GSE12603 | 73904425 | 73904948 | 523 | 4907 |
| hScc1 | CdLS | GSE12603 | 73904344 | 73905080 | 736 | 4882 |
| hScc1 | G2 | GSE9613 | 73904380 | 73905117 | 737 | 4845 |
| No data |
| No data |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14473 | mRNA | STAMBP | chr2 | 73967781 | 74001665 | 122 | EST | chr2 | 73988096 | 73995709 | Sense/Antisense (SA) pairs | |