Annotation Detail for PNMA2

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Basic Information Top

Gene Symbol:	PNMA2 ( KIAA0883,MA2,MM2,RGAG2 )
Gene Full Name:	paraneoplastic antigen MA2
Band:	8p21.2
Quick Links	Entrez ID:10687; OMIM: 603970; Uniprot ID:PNMA2_HUMAN; ENSEMBL ID: ENSG00000240694; HGNC ID: 9159
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:2 results

Location(AA)	Modification
2	N-acetylalanine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_007257
Location:chr8 26418112-26427341
strand:-

Upstream the gene:11 results
Downstream the gene:1 results
Inside the gene:3 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	26426791	26428265	1474	187
ER	Fulvestrant-MCF7	GSE14664	26441238	26441278	40	13917
NRSF	Jurkat	GSE13047	26428246	26428947	701	1255
NRSF-mono	Jurkat	QuESTdata	26428208	26428857	649	1191
NRSF-poly	Jurkat	QuESTdata	26428261	26428993	732	1286
Nanog	ES	GSE20650	26442105	26442688	583	15055
Nanog	hES	GSE18292	26442169	26442696	527	15091
Oct1	Hela	GSE14283	26441241	26441283	42	13921
Oct4	ES	GSE20650	26442180	26442616	436	15057
Oct4	hES	GSE21916	26442023	26442667	644	15004
Sox2	hES	GSE18292	26442223	26442591	368	15066

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	26416677	26416952	275	1298

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
H3K27me3	colorectal	cancer	26425246	26426616	1370	0
Nanog	hES	GSE18292	26425576	26425820	244	0
Oct1	Hela	GSE14283	26422656	26422711	55	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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