AutismKB 2.0

Annotation Detail for TBR1


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Basic Information Top
Gene Symbol:TBR1 ( MGC141978,TES-56 )
Gene Full Name: T-box, brain, 1
Band: 2q24.2
Quick LinksEntrez ID:10716; OMIM: 604616; Uniprot ID:TBR1_HUMAN; ENSEMBL ID: ENSG00000136535; HGNC ID: 11590
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
19N-linkedHMM predict
27Phosphoserine(ATM)HMM predict
50Phosphoserine(CDC2)HMM predict
61N-linkedHMM predict
67N-linkedHMM predict
96Phosphoserine(IKK)HMM predict
108Phosphoserine(ATM)HMM predict
111Phosphoserine(IKK)HMM predict
111Phosphoserine(ATM)HMM predict
115Phosphoserine(IKK)HMM predict
121O-linkedHMM predict
138O-linkedHMM predict
163N-linkedHMM predict
222Phosphothreonine(PKC)HMM predict
240N-linkedHMM predict
287Phosphotyrosine(INSR)HMM predict
287Phosphotyrosine(Jak)HMM predict
351Phosphoserine(ATM)HMM predict
395Phosphotyrosine(INSR)HMM predict
410Phosphoserine(IKK)HMM predict
410Phosphoserine(ATM)HMM predict
410Phosphoserine(CDC2)HMM predict
412N-linkedHMM predict
414Phosphoserine(CDC2)HMM predict
469Phosphoserine(CDC2)HMM predict
469Phosphoserine(CDK)HMM predict
480Phosphoserine(CDK)HMM predict
480Phosphoserine(CDC2)HMM predict
487Phosphothreonine(CDC2)HMM predict
610Phosphoserine(CK1)HMM predict
632Phosphotyrosine(SRC)HMM predict
641Phosphoserine(PKB)HMM predict
641Phosphoserine(PKG)HMM predict
641Phosphoserine(CDC2)HMM predict
641Phosphoserine(CAMK2)HMM predict
645Phosphothreonine(CDC2)HMM predict
645PhosphothreonineHMM predict
645Phosphothreonine(CDK)HMM predict
645Phosphothreonine(MAPK)HMM predict
648O-linkedHMM predict
648Phosphoserine(CK2)HMM predict
652Phosphoserine(ATM)HMM predict
652PhosphoserineHMM predict
652Phosphoserine(CDC2)HMM predict
652Phosphoserine(IKK)HMM predict
652Phosphoserine(CDK)HMM predict
652Phosphoserine(CDK)HMM predict
666LysineHMM predict
668S-farnesylHMM predict
672IsoleucineHMM predict
675Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006593
  • Location:chr2 161980865-161989818
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 161978756 161979295 539 1840
TFAP2C MCF7GSE21234 161979107 161979574 467 1525
hScc1 BcellGSE12603 161978816 161979264 448 1826
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 161992680 161992986 306 3015
hScc1 BcellGSE12603 161991780 161992129 349 2136
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 161981581 161981720 139 0
CTCF G2GSE9613 161983527 161983714 187 0
CTCF G2GSE9613 161988118 161988876 758 0
H3K27me3 colorectalcancer 161980626 161983527 2901 0
hScc1 BcellGSE12603 161981477 161981801 324 0
hScc1 BcellGSE12603 161987963 161988738 775 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
15196 mRNA TBR1 chr2 162098126 162107080 209 EST chr2 162104676 162105595Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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