AutismKB 2.0

Annotation Detail for TCFL5


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Basic Information Top
Gene Symbol:TCFL5 ( CHA,E2BP-1,Figlb,MGC46135,bHLHe82 )
Gene Full Name: transcription factor-like 5 (basic helix-loop-helix)
Band: 20q13.33
Quick LinksEntrez ID:10732; OMIM: 604745; Uniprot ID:TCFL5_HUMAN; ENSEMBL ID: ENSG00000101190; HGNC ID: 11646
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
196N-linkedHMM predict
198O-linkedHMM predict
203O-linkedHMM predict
214O-linkedHMM predict
218O-linkedHMM predict
224N-linkedHMM predict
226Phosphoserine(ATM)HMM predict
226Phosphoserine(CK1)HMM predict
230Phosphoserine(IKK)HMM predict
295N-linkedHMM predict
333Phosphoserine(CK2)HMM predict
344Phosphoserine(ATM)HMM predict
391Phosphothreonine(PKC)HMM predict
433O-linkedHMM predict
433Phosphoserine(IKK)HMM predict
442Phosphoserine(IKK)HMM predict
445Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006602
  • Location:chr20 60942912-60963559
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 60963559 60964036 477 238
hScc1 BcellGSE12603 60963559 60963996 437 218
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 60949248 60949983 735 0
H3ac HepG2E 60954280 60955099 819 0
H3ac HepG2E 60960345 60961463 1118 0
H3ac HepG2E 60961808 60962370 562 0
NFkBII GM12878GSE19485 60960002 60961333 1331 0
hScc1 BcellGSE12603 60962673 60963129 456 0
p63 keratinocytesGSE17611 60958602 60959646 1044 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
16651 mRNA COL9A3 chr20 60918831 60942955 43 mRNA TCFL5 chr20 60942912 60963560Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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