Annotation Detail for POP4
Basic Information Top
| Gene Symbol: | POP4 ( RPP29 ) |
|---|---|
| Gene Full Name: | processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) |
| Band: | 19q12 |
| Quick Links | Entrez ID:10775; OMIM: 606114; Uniprot ID:RPP29_HUMAN; ENSEMBL ID: ENSG00000105171; HGNC ID: 30081 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 10 | Phosphoserine. | |
| 145 | Phosphoserine. | |
| 150 | Phosphotyrosine. | |
| 161 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 15 | N-linked | HMM predict |
| 39 | Phosphothreonine(PKA) | HMM predict |
| 145 | Phosphoserine(IKK) | HMM predict |
| 214 | Alanine | HMM predict |
- RefSeq ID: NM_006627
- Location:chr19 34789040-34798545
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 34780109 | 34780248 | 139 | 8862 |
| CTCF | CD4 | SISSRdata | 34780109 | 34780248 | 139 | 8862 |
| CTCF | G2 | GSE9613 | 34779920 | 34780350 | 430 | 8906 |
| ETS1 | Jurkat | GSE17954 | 34788220 | 34789598 | 1378 | 132 |
| H3ac | HepG2 | E | 34788429 | 34788829 | 400 | 412 |
| Nanog | hES | GSE18292 | 34778940 | 34779312 | 372 | 9915 |
| P300 | T0-glioblastoma | GSE21026 | 34788680 | 34789308 | 628 | 47 |
| P300 | T30-glioblastoma | GSE21026 | 34788356 | 34789313 | 957 | 206 |
| PHF8 | 293T | GSE20725 | 34788327 | 34789657 | 1330 | 49 |
| PHF8 | Hs68minusFBS | GSE20725 | 34788383 | 34789395 | 1012 | 152 |
| PHF8 | Hs68plusFBS | GSE20725 | 34788110 | 34789782 | 1672 | 95 |
| Rb | Quiescent | GSE19898 | 34788883 | 34789156 | 273 | 21 |
| TFAP2C | MCF7 | GSE21234 | 34770109 | 34770672 | 563 | 18650 |
| hScc1 | Bcell | GSE12603 | 34779887 | 34780350 | 463 | 8922 |
| hScc1 | CdLS | GSE12603 | 34779751 | 34780350 | 599 | 8990 |
| hScc1 | G2 | GSE9613 | 34779858 | 34780350 | 492 | 8937 |
| p130 | Quiescent | GSE19898 | 34788358 | 34789352 | 994 | 186 |
| p130 | Senescent | GSE19898 | 34770312 | 34770476 | 164 | 18647 |
| p130 | Senescent | GSE19898 | 34788473 | 34789466 | 993 | 71 |
| p130 | shRbQuiescent | GSE19898 | 34788358 | 34789542 | 1184 | 91 |
| p130 | shRbSenescent | GSE19898 | 34788358 | 34789420 | 1062 | 152 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 34817515 | 34817545 | 30 | 18985 |
| hScc1 | Bcell | GSE12603 | 34799310 | 34799640 | 330 | 930 |
| hScc1 | Bcell | GSE12603 | 34803239 | 34804223 | 984 | 5186 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 34793386 | 34793746 | 360 | 0 |
| CTCF | CD4 | SISSRdata | 34793386 | 34793746 | 360 | 0 |
| CTCF | Hela | GSE12889 | 34793277 | 34793607 | 330 | 0 |
| CTCF | G2 | GSE9613 | 34793290 | 34793707 | 417 | 0 |
| Myc | hES | GSE17917 | 34792954 | 34793280 | 326 | 0 |
| Rb | Senescent | GSE19898 | 34793459 | 34793644 | 185 | 0 |
| hScc1 | Bcell | GSE12603 | 34793020 | 34793783 | 763 | 0 |
| hScc1 | Bcell | GSE12603 | 34795886 | 34796110 | 224 | 0 |
| hScc1 | CdLS | GSE12603 | 34793217 | 34793953 | 736 | 0 |
| hScc1 | G2 | GSE9613 | 34793290 | 34793847 | 557 | 0 |
Validated miRNA targets