AutismKB 2.0

Annotation Detail for WDR4


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Basic Information Top
Gene Symbol:WDR4 ( TRM82 )
Gene Full Name: WD repeat domain 4
Band: 21q22.3
Quick LinksEntrez ID:10785; OMIM: 605924; Uniprot ID:WDR4_HUMAN; ENSEMBL ID: ENSG00000160193; HGNC ID: 12756
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
391Phosphoserine.
411Phosphoserine.
Location(AA) Modifications Resource
391Phosphoserine.Swiss-Prot 53.0
391PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
26Phosphoserine(IKK)HMM predict
29Phosphoserine(CK2)HMM predict
30Phosphoserine(CK2)HMM predict
70Phosphoserine(CAMK2)HMM predict
70Phosphoserine(CK1)HMM predict
226S-palmitoylHMM predict
227S-palmitoylHMM predict
356Phosphoserine(IKK)HMM predict
367N-linkedHMM predict
391Phosphoserine(CDC2)HMM predict
391Phosphoserine(PKG)HMM predict
391Phosphoserine(PKA)HMM predict
391Phosphoserine(PKB)HMM predict
391PhosphoserineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018669
  • Location:chr21 43142404-43172746
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 43172790 43173323 533 310
H3ac HepG2E 43174401 43174952 551 1930
NFkBII GM18526GSE19485 43171620 43173974 2354 51
Oct4 hESGSE17917 43172676 43173122 446 153
RARG MCF7GSE15244 43172901 43173323 422 366
TAF k562GSE8489 43172866 43173323 457 348
p130 QuiescentGSE19898 43172609 43173044 435 80
p130 shRbSenescentGSE19898 43172358 43173205 847 35
p130 SGSE7516 43172493 43173041 548 21
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 43171701 43173387 1686 0
CTCF CD4GSE12889 43144040 43144221 181 0
CTCF CD4SISSRdata 43144040 43144221 181 0
CTCF G2GSE9613 43143993 43144446 453 0
CTCF G2GSE9613 43157432 43158239 807 0
CTCF G2GSE9613 43172385 43172725 340 0
ETS1 JurkatGSE17954 43171433 43173304 1871 0
FOXA1 MCF7GSE15244 43171839 43172222 383 0
H3K4me2 HCT116GSE10453 43171259 43171543 284 0
H3K4me3 colorectalcancer 43171259 43172054 795 0
H3ac HepG2E 43171259 43172196 937 0
KLF4 hESGSE17917 43172654 43172810 156 0
Myc hESGSE17917 43172181 43172422 241 0
NFkBII GM12878GSE19485 43171776 43173514 1738 0
PHF8 HeLaGSE20725 43171854 43173450 1596 0
PHF8 Hs68minusFBSGSE20725 43171908 43173393 1485 0
PHF8 Hs68plusFBSGSE20725 43171700 43173221 1521 0
Rb GrowingGSE19898 43172603 43172766 163 0
Rb QuiescentGSE19898 43172531 43172854 323 0
Rb SenescentGSE19898 43172469 43172921 452 0
STAT1 IFNSISSRdata 43143961 43144398 437 0
TAF k562GSE8489 43171259 43172425 1166 0
USF1 HepG2E 43171259 43172313 1054 0
USF2 HepG2E 43171259 43172196 937 0
hScc1 BcellGSE12603 43143993 43144369 376 0
hScc1 BcellGSE12603 43146122 43146830 708 0
hScc1 BcellGSE12603 43153632 43154168 536 0
hScc1 BcellGSE12603 43158699 43159197 498 0
hScc1 BcellGSE12603 43172339 43172725 386 0
p130 SenescentGSE19898 43172056 43173176 1120 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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