AutismKB 2.0

Annotation Detail for SDCCAG3


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Basic Information Top
Gene Symbol:SDCCAG3 ( NY-CO-3 )
Gene Full Name: serologically defined colon cancer antigen 3
Band: 9q34.3
Quick LinksEntrez ID:10807; OMIM: NA; Uniprot ID:SDCG3_HUMAN; ENSEMBL ID: ENSG00000165689; HGNC ID: 10667
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
243Phosphoserine.
247Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001039707
  • Location:chr9 138416195-138424874
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NFkBII GM15510GSE19485 138424291 138425505 1214 24
P300 T0-glioblastomaGSE21026 138424507 138425286 779 22
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 138414301 138414756 455 1667
CTCF CD4SISSRdata 138414301 138414756 455 1667
ETS1 JurkatGSE17954 138414059 138414936 877 1698
VDR GM10861-UnstimGSE22484 138413838 138415181 1343 1686
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
GABP k562GSE8489 138415196 138417196 2000 0
NFkBII GM12878GSE19485 138417408 138419312 1904 0
NFkBII GM12892GSE19485 138417576 138419422 1846 0
PHF8 HeLaGSE20725 138423771 138425908 2137 0
Pol2 GM12878GSE19551 138424532 138425166 634 0
VDR GM10855-UnstimGSE22484 138423971 138425545 1574 0
hScc1 BcellGSE12603 138424484 138424960 476 0
p130 SenescentGSE19898 138424102 138424310 208 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018