AutismKB 2.0

Annotation Detail for TUBGCP2


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Basic Information Top
Gene Symbol:TUBGCP2 ( GCP2,MGC138162,SPBC97,Spc97p )
Gene Full Name: tubulin, gamma complex associated protein 2
Band: 10q26.3
Quick LinksEntrez ID:10844; OMIM: NA; Uniprot ID:GCP2_HUMAN; ENSEMBL ID: ENSG00000130640; HGNC ID: 18599
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
83Phosphotyrosine.
827N6-acetyllysine.
Location(AA) Modifications Resource
83Phosphotyrosine.Swiss-Prot 53.0
83PhosphotyrosinePhospho.ELM 6.0
Location(AA) Modification Resource
35N-linkedHMM predict
39Phosphotyrosine(Jak)HMM predict
42O-linkedHMM predict
117O-linkedHMM predict
118O-linkedHMM predict
119O-linkedHMM predict
201O-linkedHMM predict
281Phosphoserine(CK2)HMM predict
285Phosphotyrosine(SRC)HMM predict
427PhosphotyrosineHMM predict
484Phosphotyrosine(EGFR)HMM predict
547Phosphothreonine(MAPK)HMM predict
562Phosphoserine(PKA)HMM predict
562O-linkedHMM predict
662N-linkedHMM predict
681Phosphothreonine(PKC)HMM predict
717Phosphoserine(CK2)HMM predict
873Phosphoserine(CK1)HMM predict
877Phosphoserine(IKK)HMM predict
877Phosphoserine(ATM)HMM predict
891ProlineHMM predict
895ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006659
  • Location:chr10 134943127-134972633
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 134941969 134942700 731 793
TFAP2C MCF7GSE21234 134941049 134942996 1947 1105
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 134956448 134957245 797 0
CTCF CD4GSE12889 134971249 134971524 275 0
CTCF CD4SISSRdata 134971249 134971524 275 0
ER Breast-CancerGSE22609 134957161 134957523 362 0
ER MCF7GSE19013 134943817 134944343 526 0
ETS1 JurkatGSE17954 134971769 134972929 1160 0
H3ac HepG2E 134971603 134971944 341 0
P300 T0-glioblastomaGSE21026 134956535 134957063 528 0
P300 T30-glioblastomaGSE21026 134956629 134957416 787 0
P300 T30-glioblastomaGSE21026 134971986 134972713 727 0
PHF8 Hs68plusFBSGSE20725 134971214 134973226 2012 0
Rb SenescentGSE19898 134956778 134957325 547 0
Rb SenescentGSE19898 134972071 134972354 283 0
hScc1 BcellGSE12603 134971603 134971738 135 0
hScc1 BcellGSE12603 134972086 134972296 210 0
p130 SenescentGSE19898 134956418 134956872 454 0
p130 shRbSenescentGSE19898 134956532 134956824 292 0
p130 shRbSenescentGSE19898 134971520 134971807 287 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3884 mRNA ZNF511 chr10 135011303 135015547 126 mRNA TUBGCP2 chr10 134982026 135014722Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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