AutismKB 2.0

Annotation Detail for TCERG1


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Basic Information Top
Gene Symbol:TCERG1 ( CA150,MGC133200,TAF2S,Urn1 )
Gene Full Name: transcription elongation regulator 1
Band: 5q32
Quick LinksEntrez ID:10915; OMIM: 605409; Uniprot ID:TCRG1_HUMAN; ENSEMBL ID: ENSG00000113649; HGNC ID: 15630
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
481Phosphoserine.
489Phosphothreonine.
630Nuclear localization signal (Potential).
Location(AA) Modifications Resource
Location(AA) Modification Resource
57MethylarginineHMM predict
105O-linkedHMM predict
127Phosphothreonine(CDK)HMM predict
140N-linkedHMM predict
142Phosphothreonine(CDC2)HMM predict
259O-linkedHMM predict
260Phosphothreonine(MAPK)HMM predict
260O-linkedHMM predict
262O-linkedHMM predict
263O-linkedHMM predict
264O-linkedHMM predict
264O-linkedHMM predict
265O-linkedHMM predict
265PhosphoserineHMM predict
265Phosphoserine(CDC2)HMM predict
272O-linkedHMM predict
273O-linkedHMM predict
273Phosphoserine(IKK)HMM predict
273O-linkedHMM predict
274O-linkedHMM predict
278Phosphothreonine(CDK)HMM predict
278O-linkedHMM predict
278Phosphothreonine(MAPK)HMM predict
280O-linkedHMM predict
280Phosphoserine(CK1)HMM predict
281Phosphoserine(IKK)HMM predict
282O-linkedHMM predict
283O-linkedHMM predict
284Phosphoserine(CK1)HMM predict
284O-linkedHMM predict
284O-linkedHMM predict
284Phosphoserine(IKK)HMM predict
285O-linkedHMM predict
286O-linkedHMM predict
287O-linkedHMM predict
290O-linkedHMM predict
291O-linkedHMM predict
291O-linkedHMM predict
297Phosphoserine(IKK)HMM predict
298O-linkedHMM predict
301O-linkedHMM predict
305Phosphothreonine(MAPK)HMM predict
307O-linkedHMM predict
311O-linkedHMM predict
311Phosphoserine(IKK)HMM predict
314O-linkedHMM predict
316O-linkedHMM predict
318O-linkedHMM predict
321Phosphothreonine(CDK)HMM predict
325O-linkedHMM predict
331Phosphothreonine(PKC)HMM predict
347Phosphoserine(IKK)HMM predict
347O-linkedHMM predict
347Phosphoserine(ATM)HMM predict
390Phosphotyrosine(Jak)HMM predict
450N-linkedHMM predict
489PhosphothreonineHMM predict
512Phosphothreonine(CK2)HMM predict
548N-linkedHMM predict
591Phosphothreonine(PKA)HMM predict
638Phosphoserine(CK1)HMM predict
788Phosphoserine(CK1)HMM predict
810Phosphoserine(CK1)HMM predict
917Phosphoserine(IKK)HMM predict
924Phosphothreonine(PKC)HMM predict
924Phosphothreonine(PKA)HMM predict
1057Phosphotyrosine(Jak)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001040006
  • Location:chr5 145807065-145871260
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 145786928 145787325 397 19939
CTCF CD4GSE12889 145806684 145806930 246 259
CTCF CD4SISSRdata 145786928 145787325 397 19939
CTCF CD4SISSRdata 145806684 145806930 246 259
CTCF HelaGSE12889 145806688 145806996 308 224
CTCF JurkatGSE12889 145806739 145807009 270 192
CTCF G2GSE9613 145786770 145787556 786 19903
CTCF G2GSE9613 145806527 145807052 525 276
E2F4 G0GSE7516 145806464 145807380 916 144
LIN9 G0GSE7516 145806292 145807710 1418 65
P300 T0-glioblastomaGSE21026 145806345 145807490 1145 148
TAF HelaGSE8489 145806464 145807162 698 253
USF1 HepG2E 145806630 145807230 600 136
hScc1 BcellGSE12603 145786770 145787448 678 19957
hScc1 G2GSE9613 145786734 145787413 679 19992
p130 G0GSE7516 145806464 145807482 1018 93
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 145806474 145808130 1656 0
H3ac HepG2E 145808063 145810514 2451 0
LIN9 SGSE7516 145806594 145807710 1116 0
P300 T30-glioblastomaGSE21026 145806310 145808473 2163 0
PHF8 293TGSE20725 145806820 145807818 998 0
PHF8 HeLaGSE20725 145806692 145808058 1366 0
PHF8 Hs68minusFBSGSE20725 145806656 145808190 1534 0
TAF HelaGSE8489 145808770 145809293 523 0
TAF k562GSE8489 145808063 145808437 374 0
TFAP2C MCF7GSE21234 145851100 145851463 363 0
p130 QuiescentGSE19898 145806778 145807543 765 0
p130 SenescentGSE19898 145806559 145808040 1481 0
p130 shRbQuiescentGSE19898 145806564 145807631 1067 0
p130 shRbSenescentGSE19898 145806575 145807565 990 0
p130 SGSE7516 145806667 145807710 1043 0
Validated miRNA targets Top
Cis-Nats regulation Top

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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