AutismKB 2.0

Annotation Detail for SUB1


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Basic Information Top
Gene Symbol:SUB1 ( MGC102747,P15,PC4,p14 )
Gene Full Name: SUB1 homolog (S. cerevisiae)
Band: 5p13.3
Quick LinksEntrez ID:10923; OMIM: 600503; Uniprot ID:TCP4_HUMAN; ENSEMBL ID: ENSG00000113387; HGNC ID: 19985
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
9Phosphoserine.
10Phosphoserine.
11Phosphoserine.
12Phosphoserine.
13Phosphoserine.
15Phosphoserine.
17Phosphoserine.
19Phosphoserine.
35N6-acetyllysine.
50Phosphoserine.
52Phosphoserine.
56Phosphoserine.
58Phosphoserine.
68N6-acetyllysine.
104Phosphoserine.
118Phosphoserine.
Location(AA) Modifications Resource
8Phosphoserine (CK2
9Phosphoserine.Swiss-Prot 53.0
9Phosphoserine (CK2
10Phosphoserine.Swiss-Prot 53.0
11Phosphoserine.Swiss-Prot 53.0
11Phosphoserine (CK2
12Phosphoserine.Swiss-Prot 53.0
12Phosphoserine (CK2
13Phosphoserine.Swiss-Prot 53.0
14Phosphoserine (CK2
15Phosphoserine.Swiss-Prot 53.0
16Phosphoserine (CK2
17Phosphoserine.Swiss-Prot 53.0
18Phosphoserine (CK2
19Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
9O-linkedHMM predict
10Phosphoserine(CK1)HMM predict
17Phosphoserine(CK2)HMM predict
19Phosphoserine(CK1)HMM predict
50Phosphoserine(CDC2)HMM predict
50Phosphoserine(CK1)HMM predict
50Phosphoserine(PKG)HMM predict
50Phosphoserine(PKC)HMM predict
51O-linkedHMM predict
118Phosphoserine(CK2)HMM predict
118Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006713
  • Location:chr5 32621433-32637818
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 32610434 32610654 220 10890
TAF HelaGSE8489 32619404 32619797 393 1833
TAFII hESGSE17917 32621254 32621601 347 6
USF1 HepG2E 32618442 32619031 589 2697
USF1 HepG2E 32619404 32619797 393 1833
USF1 HepG2E 32620129 32621643 1514 548
USF2 HepG2E 32620167 32621594 1427 553
hScc1 BcellGSE12603 32619404 32619797 393 1833
hScc1 CdLSGSE12603 32619404 32619797 393 1833
p130 SenescentGSE19898 32618704 32618893 189 2635
p130 shRbSenescentGSE19898 32618610 32618852 242 2703
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 32648973 32649311 338 11324
CTCF CD4SISSRdata 32648973 32649311 338 11324
CTCF G2GSE9613 32648648 32649146 498 11079
ER Fulvestrant-MCF7GSE14664 32650241 32650278 37 12441
Myc K562GSE19551 32648846 32649207 361 11208
Oct1 H2O2-HelaGSE14283 32645201 32645235 34 7400
Oct1 HelaGSE14283 32645201 32645237 36 7401
Oct1 HelaGSE14283 32650244 32650282 38 12445
TAFII hESGSE17917 32649026 32649292 266 11341
hScc1 BcellGSE12603 32648575 32649146 571 11042
hScc1 CdLSGSE12603 32648711 32649146 435 11110
hScc1 G2GSE9613 32648423 32649146 723 10966
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF HelaGSE12889 32626150 32626335 185 0
CTCF G2GSE9613 32621366 32622085 719 0
H3K4me3 colorectalcancer 32622298 32622786 488 0
H3ac HepG2E 32622230 32623451 1221 0
NFkBII GM15510GSE19485 32620924 32622713 1789 0
Oct1 HelaGSE14283 32628519 32628593 74 0
PHF8 293TGSE20725 32621127 32622226 1099 0
PHF8 HeLaGSE20725 32620955 32622441 1486 0
Pol2 GM12878GSE19551 32621201 32622538 1337 0
Rb shRbSenescenceGSE19898 32621896 32622136 240 0
TAF HelaGSE8489 32622442 32623451 1009 0
TAF HelaGSE8489 32626940 32627310 370 0
USF1 HepG2E 32622565 32623451 886 0
hScc1 BcellGSE12603 32621408 32621594 186 0
hScc1 CdLSGSE12603 32626208 32626427 219 0
p130 QuiescentGSE19898 32621306 32621648 342 0
p130 SenescentGSE19898 32621217 32621799 582 0
p130 SenescentGSE19898 32621923 32622181 258 0
p130 shRbSenescentGSE19898 32621875 32622179 304 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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