Annotation Detail for FERMT2

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	FERMT2 ( DKFZp686G11125,FLJ34213,FLJ44462,KIND2,MIG2,PLEKHC1,UNC112,UNC112B,mig-2 )
Gene Full Name:	fermitin family member 2
Band:	14q22.1
Quick Links	Entrez ID:10979; OMIM: 607746; Uniprot ID:FERM2_HUMAN; ENSEMBL ID: ENSG00000073712; HGNC ID: 15767
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	52497702	52497872	170	10328
CTCF	CD4	SISSRdata	52497702	52497872	170	10328
CTCF	Hela	GSE12889	52497662	52497822	160	10283
CTCF	G2	GSE9613	52487968	52488327	359	688
CTCF	G2	GSE9613	52497603	52497833	230	10259
H3K27me3	colorectal	cancer	52488293	52490211	1918	1793
PHF8	HeLa	GSE20725	52486766	52488523	1757	185
RARA	MCF7	GSE15244	52497061	52497833	772	9988
Rb	Quiescent	GSE19898	52488447	52488688	241	1108
TFAP2C	MCF7	GSE21234	52487817	52488805	988	852
hScc1	Bcell	GSE12603	52487368	52487832	464	141
hScc1	Bcell	GSE12603	52497425	52497833	408	10170
hScc1	CdLS	GSE12603	52487155	52488118	963	177
hScc1	CdLS	GSE12603	52497232	52497833	601	10073
p130	Quiescent	GSE19898	52488546	52488772	226	1200
p130	shRbQuiescent	GSE19898	52488037	52488556	519	837
p130	shRbSenescent	GSE19898	52487433	52487751	318	133

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CBP	T0-glioblastoma	GSE21026	52382380	52382939	559	11083
Nanog	hES	GSE18292	52380735	52381249	514	12751
RARG	MCF7	GSE15244	52390064	52390352	288	3535

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
ER	Fulvestrant-MCF7	GSE14664	52477211	52477255	44
ER	Fulvestrant-MCF7	GSE14664	52480483	52480516	33
FoxA1	MCF7	MACSdata	52471316	52471539	223
H3K27me3	colorectal	cancer	52485929	52487226	1297
H3K4me2	HCT116	GSE10453	52486210	52486719	509
H3K4me3	colorectal	cancer	52486210	52487368	1158
H3ac	HepG2	E	52485463	52486897	1434
Nanog	hES	GSE18292	52409726	52409983	257
Oct1	Hela	GSE14283	52421156	52421189	33
Oct1	Hela	GSE14283	52480483	52480517	34
PHF8	Hs68minusFBS	GSE20725	52486554	52487561	1007
RARA	MCF7	GSE15244	52456476	52456730	254
RARG	MCF7	GSE15244	52456539	52456730	191
RARG	MCF7	GSE15244	52486281	52486755	474
TAF	Hela	GSE8489	52486002	52486827	825
TFAP2C	MCF7	GSE21234	52437067	52437660	593
TFAP2C	MCF7	GSE21234	52454113	52454654	541
hScc1	CdLS	GSE12603	52460418	52460748	330

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7b	hsa-let-7b	22	18668040
hsa-let-7b*	hsa-let-7b	22	18668040
hsa-miR-1	hsa-mir-1-2	18	18668040
hsa-miR-1	hsa-mir-1-1	20	18668040
hsa-miR-155	hsa-mir-155	21	18668040
hsa-miR-155*	hsa-mir-155	21	18668040
hsa-miR-16	hsa-mir-16-1	13	18668040
hsa-miR-16	hsa-mir-16-2	3	18668040
hsa-miR-30a	hsa-mir-30a	6	18668040
hsa-miR-30a*	hsa-mir-30a	6	18668040
hsa-miR-30b	hsa-mir-30b	8	18668040
hsa-miR-30b*	hsa-mir-30b	8	18668040
hsa-miR-30c	hsa-mir-30c-2	6	18668040
hsa-miR-30c	hsa-mir-30c-1	1	18668040
hsa-miR-30c-1*	hsa-mir-30c-1	1	18668040
hsa-miR-30c-2*	hsa-mir-30c-2	6	18668040
hsa-miR-30d	hsa-mir-30d	8	18668040
hsa-miR-30d*	hsa-mir-30d	8	18668040
hsa-miR-30e	hsa-mir-30e	1	18668040
hsa-miR-30e*	hsa-mir-30e	1	18668040

ID in Tarbase	Data Type	Support Type	miRNA	Gene	Direct Support	Publication
1180	Unknown	pSILAC	miR-1	PLEKHC1	down 50-25%	18668040
Ensembl	Protein Type	Differentially expressed in	Pathology or Event	Mis Regulation	Gene Expression	Tumour Involvement
ENSG00000073712		n_a	n_a	n_a	"epithelium, lymphocyte"	"benign tumour, malignant tumour, carcinoma, sarcoma"

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018