Annotation Detail for GLIPR1

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Basic Information Top

Gene Symbol:	GLIPR1 ( CRISP7,GLIPR,RTVP1 )
Gene Full Name:	GLI pathogenesis-related 1
Band:	12q21.2
Quick Links	Entrez ID:11010; OMIM: 602692; Uniprot ID:GLIP1_HUMAN; ENSEMBL ID: ENSG00000139278; HGNC ID: 17001
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:3 results

No data

Location(AA)	Modification	Resource
17	N-linked	HMM predict
23	N-linked	HMM predict
92	N-linked	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_006851
Location:chr12 74160779-74181981
strand:+

Upstream the gene:6 results
Downstream the gene:0 results
Inside the gene:13 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CBP	T30-glioblastoma	GSE21026	74159844	74161569	1725	73
ER	Fulvestrant-MCF7	GSE14664	74142885	74142962	77	17856
ER	Fulvestrant-MCF7	GSE14664	74149744	74149800	56	11008
Oct1	H2O2-Hela	GSE14283	74145719	74145753	34	15044
Oct1	Hela	GSE14283	74145718	74145753	35	15044
p130	shRbQuiescent	GSE19898	74159891	74160477	586	596

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	74165297	74165564	267	0
CTCF	CD4	GSE12889	74168631	74168894	263	0
CTCF	CD4	SISSRdata	74165297	74165564	267	0
CTCF	CD4	SISSRdata	74168631	74168894	263	0
CTCF	G2	GSE9613	74160730	74161057	327	0
CTCF	G2	GSE9613	74165158	74165548	390	0
CTCF	G2	GSE9613	74168662	74169015	353	0
FOXA1	MCF7	GSE15244	74169476	74169808	332	0
Oct1	Hela	GSE14283	74171927	74171956	29	0
Oct1	Hela	GSE14283	74172257	74172290	33	0
P300	T30-glioblastoma	GSE21026	74159685	74162932	3247	0
RARG	MCF7	GSE15244	74169512	74169844	332	0
hScc1	G2	GSE9613	74168662	74168913	251	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
6324	mRNA	GLIPR1	chr12	74160800	74179158	315	mRNA	HRB2	chr12	74177685	74191659	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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