AutismKB 2.0

Annotation Detail for CHD2


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Basic Information Top
Gene Symbol:CHD2 ( DKFZp547I1315,DKFZp686E01200,DKFZp781D1727,FLJ38614 )
Gene Full Name: chromodomain helicase DNA binding protein 2
Band: 15q26.1
Quick LinksEntrez ID:1106; OMIM: 602119; Uniprot ID:CHD2_HUMAN; ENSEMBL ID: ENSG00000173575; HGNC ID: 1917
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
240Phosphothreonine.
242Phosphoserine.
620DEAH box.
747Phosphoserine.
1012Phosphoserine.
1801Phosphoserine.
1807Phosphoserine.
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001042572
  • Location:chr15 91244422-91293464
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 91226784 91227478 694 17292
FOXA1 MCF7GSE15244 91225785 91226720 935 18170
FOXA1 eGFPGSE10845 91225785 91226720 935 18170
Fos K562GSE19551 91225993 91227092 1099 17880
H3ac HepG2E 91225345 91226505 1160 18498
H3ac HepG2E 91227778 91228732 954 16168
PHF8 293TGSE20725 91226082 91227578 1496 17593
PHF8 HeLaGSE20725 91226920 91228163 1243 16881
PHF8 Hs68plusFBSGSE20725 91225930 91227700 1770 17608
TAF HelaGSE8489 91227814 91230982 3168 15025
TAF HelaGSE8489 91242255 91244148 1893 1221
TAF k562GSE8489 91227814 91229010 1196 16011
TFAP2C MCF7GSE21234 91226004 91226877 873 17982
hScc1 BcellGSE12603 91227049 91227455 406 17171
p130 QuiescentGSE19898 91226993 91227163 170 17345
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018