AutismKB 2.0

Annotation Detail for KATNA1


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Basic Information Top
Gene Symbol:KATNA1 ( - )
Gene Full Name: katanin p60 (ATPase-containing) subunit A 1
Band: 6q25.1
Quick LinksEntrez ID:11104; OMIM: 606696; Uniprot ID:KTNA1_HUMAN; ENSEMBL ID: ENSG00000186625; HGNC ID: 6216
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
170Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
39Phosphotyrosine(Jak)HMM predict
41Phosphotyrosine(Jak)HMM predict
42Phosphoserine(Jak)HMM predict
75Phosphoserine(PKC)HMM predict
109Phosphoserine(CDC2)HMM predict
109Phosphoserine(CDK)HMM predict
113MethylarginineHMM predict
117Phosphoserine(PKA)HMM predict
117O-linkedHMM predict
118Phosphoserine(ATM)HMM predict
120Phosphotyrosine(SRC)HMM predict
120Phosphotyrosine(Syk)HMM predict
132Phosphothreonine(PKC)HMM predict
168N-linkedHMM predict
170Phosphoserine(CDC2)HMM predict
175Phosphothreonine(CDK)HMM predict
187Phosphotyrosine(Syk)HMM predict
201Phosphoserine(ATM)HMM predict
268O-linkedHMM predict
272N-linkedHMM predict
319Phosphothreonine(PKC)HMM predict
378Phosphotyrosine(EGFR)HMM predict
449Phosphoserine(PKG)HMM predict
472Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_007044
  • Location:chr6 149957864-150001420
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 150010979 150011486 507 9812
ETS1 JurkatGSE17954 150010879 150012021 1142 10030
H3K4me3 colorectalcancer 150010406 150011198 792 9382
H3ac HepG2E 150010406 150011269 863 9417
Myc K562GSE19551 150010732 150012031 1299 9961
Rb QuiescentGSE19898 150011244 150011495 251 9949
TAF k562GSE8489 150008983 150010033 1050 8088
TAF k562GSE8489 150010406 150011230 824 9398
hScc1 BcellGSE12603 150011052 150011939 887 10075
p130 QuiescentGSE19898 150011203 150011541 338 9952
p130 SenescentGSE19898 150011127 150011596 469 9941
p130 shRbSenescentGSE19898 150011292 150011598 306 10025
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 149976010 149976531 521 0
p130 SenescentGSE19898 149962703 149962938 235 0
p63 keratinocytesGSE17611 149976952 149977849 897 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 15685193
hsa-miR-1 hsa-mir-1-1 20 15685193
hsa-miR-124 hsa-mir-124-1 8 15685193
hsa-miR-124 hsa-mir-124-2 8 15685193
hsa-miR-124 hsa-mir-124-3 20 15685193
hsa-miR-373 hsa-mir-373 19 15685193
hsa-miR-373* hsa-mir-373 19 15685193
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
258 Unknown MicroArray miR-124 KATNA1 n_a 15685193
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000186625 G1-to-S transition n_a n_a "epithelium, lymphocyte, muscle cell" "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma"
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
23306 EST chr6 149957651 149958320 199 mRNA KATNA1 chr6 149957864 150001421Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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