AutismKB 2.0

Annotation Detail for POLR3A


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Basic Information Top
Gene Symbol:POLR3A ( RPC1,RPC155,hRPC155 )
Gene Full Name: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
Band: 10q22.3
Quick LinksEntrez ID:11128; OMIM: NA; Uniprot ID:RPC1_HUMAN; ENSEMBL ID: ENSG00000148606; HGNC ID: 30074
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
445N6-acetyllysine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
85Phosphotyrosine(Jak)HMM predict
112S-palmitoylHMM predict
113S-palmitoylHMM predict
118Phosphoserine(ATM)HMM predict
163N-linkedHMM predict
179Phosphotyrosine(Jak)HMM predict
181Phosphothreonine(PKC)HMM predict
370Phosphoserine(CDC2)HMM predict
553Phosphothreonine(PKC)HMM predict
634N-linkedHMM predict
637Phosphotyrosine(Jak)HMM predict
776Phosphoserine(CDC2)HMM predict
815N-linkedHMM predict
843Phosphothreonine(MAPK)HMM predict
884Phosphoserine(ATM)HMM predict
889Phosphothreonine(PKC)HMM predict
941Phosphoserine(CK1)HMM predict
992N-linkedHMM predict
1097Phosphotyrosine(EGFR)HMM predict
1116Phosphotyrosine(INSR)HMM predict
1152Phosphoserine(IKK)HMM predict
1176Phosphothreonine(MAPK)HMM predict
1181Phosphoserine(IKK)HMM predict
1181Phosphoserine(PKG)HMM predict
1242O-linkedHMM predict
1249N-linkedHMM predict
1250N-linkedHMM predict
1252Phosphotyrosine(Syk)HMM predict
1252Phosphotyrosine(SRC)HMM predict
1252Phosphotyrosine(INSR)HMM predict
1315Phosphoserine(PKG)HMM predict
1340Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_007055
  • Location:chr10 79405911-79459264
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 79458840 79460177 1337 244
Fos K562GSE19551 79458935 79459880 945 143
PHF8 HeLaGSE20725 79458763 79459825 1062 30
USF1 HepG2E 79458581 79460173 1592 113
USF2 HepG2E 79458581 79460173 1592 113
hScc1 BcellGSE12603 79459038 79459513 475 11
hScc1 CdLSGSE12603 79458893 79459670 777 17
p130 shRbSenescentGSE19898 79459278 79459541 263 145
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 79400679 79401850 1171 4647
ER MCF7GSE19013 79401912 79402400 488 3756
Myc K562GSE19551 79400952 79401718 766 4577
Oct1 HelaGSE14283 79397516 79397582 66 8363
P300 T0-glioblastomaGSE21026 79401074 79401532 458 4609
P300 T30-glioblastomaGSE21026 79400757 79401815 1058 4626
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me3 colorectalcancer 79457986 79458257 271 0
H3K4me3 colorectalcancer 79458581 79459119 538 0
H3ac HepG2E 79457624 79458257 633 0
H3ac HepG2E 79458581 79459195 614 0
Oct1 HelaGSE14283 79423428 79423455 27 0
Oct1 HelaGSE14283 79442735 79442771 36 0
PHF8 293TGSE20725 79458643 79459746 1103 0
RARG MCF7GSE15244 79458581 79459038 457 0
USF1 HepG2E 79457624 79458257 633 0
USF2 HepG2E 79458023 79458257 234 0
hScc1 BcellGSE12603 79434127 79434489 362 0
p130 SenescentGSE19898 79458846 79459567 721 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3349 EST chr10 79406031 79406929 830 mRNA POLR3A chr10 79405911 79459265Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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