AutismKB 2.0

Annotation Detail for CORO1A


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Basic Information Top
Gene Symbol:CORO1A ( CLABP,CLIPINA,FLJ41407,HCORO1,MGC117380,TACO,p57 )
Gene Full Name: coronin, actin binding protein, 1A
Band: 16p11.2
Quick LinksEntrez ID:11151; OMIM: 605000; Uniprot ID:COR1A_HUMAN; ENSEMBL ID: ENSG00000102879; HGNC ID: 2252
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylserine.
356Phosphoserine.
449N6-acetyllysine.
Location(AA) Modifications Resource
2N-acetylserine.Swiss-Prot 53.0
Location(AA) Modification Resource
25Phosphotyrosine(Syk)HMM predict
195S-palmitoylHMM predict
209Phosphothreonine(PKA)HMM predict
209Phosphothreonine(PKC)HMM predict
236Phosphothreonine(PKC)HMM predict
266Phosphothreonine(CK2)HMM predict
283Phosphotyrosine(Jak)HMM predict
315Phosphoserine(ATM)HMM predict
315Phosphoserine(IKK)HMM predict
367O-linkedHMM predict
396Phosphotyrosine(Syk)HMM predict
424Phosphothreonine(MAPK)HMM predict
424Phosphothreonine(CDK)HMM predict
431Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_007074
  • Location:chr16 30102426-30107896
  • strand:+
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 30102100 30106945 4845 0
CTCF CD4GSE12889 30106200 30106482 282 0
CTCF CD4SISSRdata 30106200 30106482 282 0
CTCF G2GSE9613 30106102 30106588 486 0
ETS1 JurkatGSE17954 30104013 30106552 2539 0
NFkBII GM15510GSE19485 30101587 30106169 4582 0
Oct1 H2O2-HelaGSE14283 30105661 30105695 34 0
Oct1 HelaGSE14283 30105661 30105694 33 0
Pol2 GM12878GSE19551 30102135 30107405 5270 0
VDR GM10861-UnstimGSE22484 30101247 30107525 6278 0
VDR GM10861-stimGSE22484 30101031 30107554 6523 0
hScc1 BcellGSE12603 30106063 30106264 201 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-106b hsa-mir-106b 7 19153141
hsa-miR-106b* hsa-mir-106b 7 19153141
hsa-miR-221 hsa-mir-221 X 19153141
hsa-miR-221 hsa-mir-221 X 18413744
hsa-miR-221* hsa-mir-221 X 19153141
hsa-miR-221* hsa-mir-221 X 18413744
hsa-miR-222 hsa-mir-222 X 19153141
hsa-miR-222 hsa-mir-222 X 18413744
hsa-miR-222* hsa-mir-222 X 19153141
hsa-miR-222* hsa-mir-222 X 18413744
hsa-miR-25 hsa-mir-25 7 19153141
hsa-miR-25* hsa-mir-25 7 19153141
hsa-miR-92b hsa-mir-92b 1 19544458
hsa-miR-92b* hsa-mir-92b 1 19544458
hsa-miR-93 hsa-mir-93 7 19153141
hsa-miR-93* hsa-mir-93 7 19153141
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9821 mRNA CORO1A chr16 30102448 30107898 99 EST chr16 30102326 30103100Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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