Annotation Detail for NUDT4
Basic Information Top
| Gene Symbol: | NUDT4 ( DIPP2,DIPP2alpha,DIPP2beta,DKFZp686I1281,KIAA0487 ) |
|---|---|
| Gene Full Name: | nudix (nucleoside diphosphate linked moiety X)-type motif 4 |
| Band: | 12q22 |
| Quick Links | Entrez ID:11163; OMIM: 609229; Uniprot ID:NUDT4_HUMAN; ENSEMBL ID: ENSG00000173598; HGNC ID: 8051 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 72 | Nudix box. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 7 | N-linked | HMM predict |
| 28 | Phosphoserine(CK2) | HMM predict |
| 68 | Phosphotyrosine(Syk) | HMM predict |
| 153 | N-linked | HMM predict |
| 173 | O-linked | HMM predict |
- RefSeq ID: NM_019094
- Location:chr12 92295831-92321152
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 92294145 | 92295406 | 1261 | 1056 |
| Oct1 | H2O2-Hela | GSE14283 | 92283286 | 92283326 | 40 | 12526 |
| Oct1 | Hela | GSE14283 | 92283286 | 92283326 | 40 | 12526 |
| Rb | Growing | GSE19898 | 92295426 | 92295666 | 240 | 286 |
| Rb | Senescent | GSE19898 | 92295352 | 92295834 | 482 | 239 |
| Rb | shRbSenescence | GSE19898 | 92294548 | 92294808 | 260 | 1154 |
| p130 | Senescent | GSE19898 | 92295264 | 92295863 | 599 | 268 |
| p130 | shRbQuiescent | GSE19898 | 92295324 | 92295820 | 496 | 260 |
| p130 | shRbSenescent | GSE19898 | 92294385 | 92294639 | 254 | 1320 |
| p130 | shRbSenescent | GSE19898 | 92294823 | 92295004 | 181 | 918 |
| p130 | shRbSenescent | GSE19898 | 92295694 | 92295914 | 220 | 28 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 92314701 | 92314973 | 272 | 0 |
| CTCF | CD4 | SISSRdata | 92314701 | 92314973 | 272 | 0 |
| CTCF | G2 | GSE9613 | 92295857 | 92296589 | 732 | 0 |
| CTCF | G2 | GSE9613 | 92308805 | 92309030 | 225 | 0 |
| CTCF | G2 | GSE9613 | 92317119 | 92317501 | 382 | 0 |
| FOXA1 | MCF7 | GSE15244 | 92296624 | 92296839 | 215 | 0 |
| FOXA1 | MCF7 | GSE15244 | 92307904 | 92308491 | 587 | 0 |
| H3K4me3 | colorectal | cancer | 92296659 | 92298270 | 1611 | 0 |
| H3ac | HepG2 | E | 92296624 | 92298673 | 2049 | 0 |
| Myc | K562 | GSE19551 | 92317152 | 92317313 | 161 | 0 |
| Nanog | hES | GSE18292 | 92314788 | 92315092 | 304 | 0 |
| RARA | MCF7 | GSE15244 | 92316939 | 92318486 | 1547 | 0 |
| Rb | Senescent | GSE19898 | 92297924 | 92298154 | 230 | 0 |
| TAF | Hela | GSE8489 | 92296589 | 92297800 | 1211 | 0 |
| TAF | k562 | GSE8489 | 92295991 | 92299626 | 3635 | 0 |
| hScc1 | Bcell | GSE12603 | 92295921 | 92296589 | 668 | 0 |
| hScc1 | Bcell | GSE12603 | 92298709 | 92299114 | 405 | 0 |
| hScc1 | Bcell | GSE12603 | 92301817 | 92302066 | 249 | 0 |
| hScc1 | Bcell | GSE12603 | 92317012 | 92317616 | 604 | 0 |
| hScc1 | CdLS | GSE12603 | 92295783 | 92296975 | 1192 | 0 |
| hScc1 | CdLS | GSE12603 | 92298457 | 92299078 | 621 | 0 |
| hScc1 | CdLS | GSE12603 | 92314498 | 92315007 | 509 | 0 |
| hScc1 | CdLS | GSE12603 | 92316975 | 92317687 | 712 | 0 |
| hScc1 | G2 | GSE9613 | 92314438 | 92315007 | 569 | 0 |
| hScc1 | G2 | GSE9613 | 92317119 | 92317476 | 357 | 0 |
| p130 | shRbQuiescent | GSE19898 | 92296525 | 92297141 | 616 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6429 | mRNA | NUDT4 | chr12 | 92274169 | 92302519 | 424 | EST | chr12 | 92301933 | 92302357 | Sense/Antisense (SA) pairs | |