AutismKB 2.0

Annotation Detail for NISCH


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Basic Information Top
Gene Symbol:NISCH ( FLJ14425,FLJ40413,FLJ90519,I-1,IRAS,KIAA0975 )
Gene Full Name: nischarin
Band: 3p21.1
Quick LinksEntrez ID:11188; OMIM: NA; Uniprot ID:NISCH_HUMAN; ENSEMBL ID: ENSG00000010322; HGNC ID: 18006
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
1022Phosphoserine.
1284Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_007184
  • Location:chr3 52464659-52502123
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 52464426 52464793 367 50
PHF8 HeLaGSE20725 52463982 52465142 1160 98
TFAP2C MCF7GSE21234 52464190 52464588 398 271
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 52480994 52481329 335 0
CTCF CD4GSE12889 52491302 52491517 215 0
CTCF CD4SISSRdata 52480994 52481329 335 0
CTCF CD4SISSRdata 52491302 52491517 215 0
CTCF JurkatGSE12889 52481118 52481291 173 0
CTCF G2GSE9613 52480611 52481558 947 0
CTCF G2GSE9613 52487064 52487248 184 0
CTCF G2GSE9613 52488095 52488698 603 0
CTCF G2GSE9613 52489138 52489339 201 0
CTCF G2GSE9613 52491933 52492963 1030 0
CTCF G2GSE9613 52495899 52496952 1053 0
CTCF G2GSE9613 52497752 52499043 1291 0
CTCF G2GSE9613 52499533 52499742 209 0
CTCF G2GSE9613 52501024 52501593 569 0
ER E2-MCF7GSE14664 52479064 52479100 36 0
ER E2-MCF7GSE14664 52484910 52484941 31 0
H3ac HepG2E 52465038 52465505 467 0
Oct1 HelaGSE14283 52479062 52479098 36 0
Oct1 HelaGSE14283 52484908 52484941 33 0
PHF8 293TGSE20725 52463926 52465529 1603 0
Rb GrowingGSE19898 52484415 52484616 201 0
TFAP2C MCF7GSE21234 52465497 52465844 347 0
TFAP2C MCF7GSE21234 52475644 52476231 587 0
TFAP2C MCF7GSE21234 52477171 52477640 469 0
TFAP2C MCF7GSE21234 52480151 52481315 1164 0
hScc1 BcellGSE12603 52480992 52481522 530 0
hScc1 BcellGSE12603 52496069 52497093 1024 0
hScc1 CdLSGSE12603 52481026 52481630 604 0
hScc1 G2GSE9613 52480827 52481380 553 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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