AutismKB 2.0

Annotation Detail for CHN1


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Basic Information Top
Gene Symbol:CHN1 ( ARHGAP2,CHN,DURS2,RHOGAP2 )
Gene Full Name: chimerin (chimaerin) 1
Band: 2q31.1
Quick LinksEntrez ID:1123; OMIM: 118423; Uniprot ID:CHIN_HUMAN; ENSEMBL ID: ENSG00000128656; HGNC ID: 1943
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
11Phosphotyrosine(Syk)HMM predict
34Phosphothreonine(PKA)HMM predict
92Phosphothreonine(PKC)HMM predict
173Phosphoserine(CK1)HMM predict
192Phosphothreonine(PKA)HMM predict
192Phosphothreonine(PKC)HMM predict
278Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001025201
  • Location:chr2 175372337-175578360
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 175580372 175581231 859 2441
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 175364941 175365270 329 7232
Nanog hESGSE18292 175360621 175360981 360 11537
Sox2 hESGSE18292 175360729 175360972 243 11487
p130 QuiescentGSE19898 175360467 175361685 1218 11262
p130 shRbQuiescentGSE19898 175360264 175361469 1205 11471
p130 shRbQuiescentGSE19898 175361810 175362225 415 10320
p130 shRbSenescentGSE19898 175360848 175361435 587 11196
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 175563299 175563532 233 0
CTCF CD4SISSRdata 175563299 175563532 233 0
CTCF G2GSE9613 175577621 175578405 784 0
Myc hESGSE17917 175577873 175578500 627 0
Oct1 H2O2-HelaGSE14283 175388382 175388424 42 0
Oct1 H2O2-HelaGSE14283 175395089 175395115 26 0
Oct1 HelaGSE14283 175388383 175388424 41 0
Oct1 HelaGSE14283 175395088 175395117 29 0
Oct4 hESGSE17917 175577712 175578007 295 0
P300 T30-glioblastomaGSE21026 175529714 175530599 885 0
P300 T30-glioblastomaGSE21026 175544541 175545844 1303 0
Rb GrowingGSE19898 175571504 175571690 186 0
SRF k562GSE8489 175505936 175506732 796 0
STAT1 IFNSISSRdata 175571243 175571931 688 0
TAF HelaGSE8489 175450582 175451019 437 0
TAF k562GSE8489 175450547 175450987 440 0
TAF k562GSE8489 175505936 175506653 717 0
TFAP2C MCF7GSE21234 175461577 175462150 573 0
TFAP2C MCF7GSE21234 175544863 175545161 298 0
hScc1 BcellGSE12603 175577621 175578336 715 0
p130 SenescentGSE19898 175420430 175420761 331 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
15306 EST chr2 175535162 175537631 27 mRNA CHN1 chr2 175489740 175695461Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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