AutismKB 2.0

Annotation Detail for PRAF2


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Basic Information Top
Gene Symbol:PRAF2 ( - )
Gene Full Name: PRA1 domain family, member 2
Band: Xp11.23
Quick LinksEntrez ID:11230; OMIM: NA; Uniprot ID:PRAF2_HUMAN; ENSEMBL ID: ENSG00000196998; HGNC ID: 28911
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_007213
  • Location:chrX 48815763-48818605
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 48818160 48819209 1049 79
P300 T30-glioblastomaGSE21026 48818136 48819140 1004 33
VDR GM10855-UnstimGSE22484 48818080 48819313 1233 91
VDR GM10855-stimGSE22484 48818057 48819392 1335 119
p130 SenescentGSE19898 48818422 48818846 424 29
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
RARG MCF7GSE15244 48815616 48815792 176 60
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 48815885 48816025 140 0
CTCF G2GSE9613 48816508 48817484 976 0
CTCF G2GSE9613 48818291 48818805 514 0
PHF8 HeLaGSE20725 48818172 48819033 861 0
hScc1 BcellGSE12603 48816899 48817666 767 0
hScc1 G2GSE9613 48816508 48817290 782 0
hScc1 G2GSE9613 48818330 48818768 438 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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