Annotation Detail for HPS5
Basic Information Top
| Gene Symbol: | HPS5 ( AIBP63,KIAA1017 ) |
|---|---|
| Gene Full Name: | Hermansky-Pudlak syndrome 5 |
| Band: | 11p15.1 |
| Quick Links | Entrez ID:11234; OMIM: 607521; Uniprot ID:HPS5_HUMAN; ENSEMBL ID: ENSG00000110756; HGNC ID: 17022 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 461 | Phosphoserine. | |
| 534 | Phosphoserine. | |
| 562 | Phosphothreonine. | |
| 563 | Phosphoserine. | |
| 695 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 89 | Phosphotyrosine(Syk) | HMM predict |
| 89 | Phosphotyrosine(EGFR) | HMM predict |
| 116 | Phosphotyrosine(EGFR) | HMM predict |
| 127 | Phosphothreonine(PKA) | HMM predict |
| 265 | Phosphoserine(PKA) | HMM predict |
| 280 | Phosphotyrosine(SRC) | HMM predict |
| 287 | Phosphoserine(ATM) | HMM predict |
| 392 | Phosphothreonine(PKA) | HMM predict |
| 436 | Phosphoserine(CK1) | HMM predict |
| 437 | Phosphoserine(PKG) | HMM predict |
| 437 | Phosphoserine(PKA) | HMM predict |
| 437 | Phosphoserine(PKB) | HMM predict |
| 437 | Phosphoserine(IKK) | HMM predict |
| 437 | Phosphoserine(CK1) | HMM predict |
| 445 | Phosphoserine(CK1) | HMM predict |
| 461 | Phosphoserine(IKK) | HMM predict |
| 461 | Phosphoserine(PKG) | HMM predict |
| 461 | Phosphoserine(ATM) | HMM predict |
| 461 | Phosphoserine | HMM predict |
| 461 | Phosphoserine(CAMK2) | HMM predict |
| 463 | Phosphoserine | HMM predict |
| 463 | Phosphoserine(ATM) | HMM predict |
| 463 | Phosphoserine(CK2) | HMM predict |
| 469 | Phosphoserine(CK1) | HMM predict |
| 505 | N-linked | HMM predict |
| 518 | N-linked | HMM predict |
| 532 | Phosphoserine(CDC2) | HMM predict |
| 532 | Phosphoserine(CDK) | HMM predict |
| 534 | Phosphoserine(CDC2) | HMM predict |
| 545 | Phosphoserine(PKG) | HMM predict |
| 554 | Phosphothreonine(PKC) | HMM predict |
| 594 | Phosphothreonine(CK2) | HMM predict |
| 602 | Phosphoserine(MAPK) | HMM predict |
| 602 | Phosphoserine(CDC2) | HMM predict |
| 677 | N-linked | HMM predict |
| 705 | Phosphothreonine | HMM predict |
| 712 | Phosphoserine(CDC2) | HMM predict |
| 797 | Phosphoserine(PKG) | HMM predict |
| 799 | Phosphoserine(IKK) | HMM predict |
| 822 | Phosphotyrosine(SRC) | HMM predict |
| 822 | Phosphotyrosine(Syk) | HMM predict |
| 822 | Phosphotyrosine(INSR) | HMM predict |
| 822 | Phosphotyrosine | HMM predict |
| 938 | O-linked | HMM predict |
| 944 | Phosphotyrosine(Jak) | HMM predict |
| 944 | Phosphotyrosine(Syk) | HMM predict |
| 949 | Phosphoserine(IKK) | HMM predict |
| 977 | Phosphothreonine(PKA) | HMM predict |
| 1050 | N-linked | HMM predict |
| 1054 | Phosphoserine(ATM) | HMM predict |
| 1111 | Alanine | HMM predict |
- RefSeq ID: NM_007216
- Location:chr11 18256792-18300296
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| HIF1 | Hypo | HepG2 | 18300140 | 18300850 | 710 | 199 |
| HIF1 | Norm | HepG2 | 18300109 | 18300850 | 741 | 183 |
| Nanog | ES | GSE20650 | 18300150 | 18300831 | 681 | 194 |
| Pol2 | GM12878 | GSE19551 | 18299817 | 18301073 | 1256 | 149 |
| Rb | Growing | GSE19898 | 18300209 | 18300644 | 435 | 130 |
| Rb | Quiescent | GSE19898 | 18300210 | 18300756 | 546 | 187 |
| Rb | Senescent | GSE19898 | 18300117 | 18300855 | 738 | 190 |
| Rb | shRbQuiescent | GSE19898 | 18300119 | 18300798 | 679 | 162 |
| Rb | shRbSenescence | GSE19898 | 18300201 | 18300721 | 520 | 165 |
| hScc1 | CdLS | GSE12603 | 18300073 | 18300850 | 777 | 165 |
| p130 | Senescent | GSE19898 | 18299944 | 18300840 | 896 | 96 |
| p130 | shRbQuiescent | GSE19898 | 18300068 | 18300834 | 766 | 155 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 18299672 | 18300872 | 1200 | 0 |
| GATA3 | MCF7 | GSE15244 | 18299848 | 18300514 | 666 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 18299139 | 18300218 | 1079 | 0 |
| H3K4me3 | colorectal | cancer | 18299530 | 18300109 | 579 | 0 |
| H3ac | HepG2 | E | 18297141 | 18298403 | 1262 | 0 |
| H3ac | HepG2 | E | 18299069 | 18300446 | 1377 | 0 |
| RARA | MCF7 | GSE15244 | 18299778 | 18300476 | 698 | 0 |
| RARG | MCF7 | GSE15244 | 18299848 | 18300476 | 628 | 0 |
| TAF | Hela | GSE8489 | 18299139 | 18300364 | 1225 | 0 |
| TAF | k562 | GSE8489 | 18299331 | 18300414 | 1083 | 0 |
| TFAP2C | MCF7 | GSE21234 | 18291297 | 18291696 | 399 | 0 |
| USF1 | HepG2 | E | 18297141 | 18298403 | 1262 | 0 |
Validated miRNA targets