AutismKB 2.0

Annotation Detail for CHN2


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Basic Information Top
Gene Symbol:CHN2 ( ARHGAP3,BCH,MGC138360,RHOGAP3 )
Gene Full Name: chimerin (chimaerin) 2
Band: 7p14.3
Quick LinksEntrez ID:1124; OMIM: 602857; Uniprot ID:CHIO_HUMAN; ENSEMBL ID: ENSG00000106069; HGNC ID: 1944
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
7Phosphoserine(CK1)HMM predict
8Phosphoserine(CK1)HMM predict
10Phosphoserine(CK1)HMM predict
12Phosphoserine(IKK)HMM predict
12O-linkedHMM predict
15Phosphoserine(CK2)HMM predict
16Phosphoserine(CK2)HMM predict
21Phosphotyrosine(Syk)HMM predict
21Phosphotyrosine(INSR)HMM predict
85Phosphoserine(ATM)HMM predict
100N-linkedHMM predict
104N-linkedHMM predict
153Phosphotyrosine(SRC)HMM predict
171Phosphoserine(PKG)HMM predict
181N-linkedHMM predict
211SulfotyrosineHMM predict
379Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001039936
  • Location:chr7 29486010-29520467
  • strand:+
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 29489261 29489992 731 0
FOXA1 MCF7GSE15244 29491571 29492003 432 0
Nanog ESGSE20650 29501716 29502186 470 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
23799 mRNA CHN2 chr7 29007565 29326169 172 EST chr7 29323155 29376526Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018