Annotation Detail for CCDC101

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Basic Information Top

Gene Symbol:	CCDC101 ( FLJ32446,SGF29,STAF36 )
Gene Full Name:	coiled-coil domain containing 101
Band:	16p11.2
Quick Links	Entrez ID:112869; OMIM: 613374; Uniprot ID:SGF29_HUMAN; ENSEMBL ID: ENSG00000176476; HGNC ID:
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:2 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
2	N-acetylalanine.
288	N6-acetyllysine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_138414
Location:chr16 28472757-28510609
strand:+

Upstream the gene:7 results
Downstream the gene:0 results
Inside the gene:18 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	28468216	28468394	178	4453
CTCF	CD4	SISSRdata	28468216	28468394	178	4453
CTCF	G2	GSE9613	28468210	28468387	177	4459
ER	Fulvestrant-MCF7	GSE14664	28470595	28470682	87	2119
ETS1	Jurkat	GSE17954	28472153	28473349	1196	7
hScc1	Bcell	GSE12603	28468139	28468387	248	4495
hScc1	CdLS	GSE12603	28468112	28468387	275	4508

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	28472893	28473310	417	0
CTCF	G2	GSE9613	28492628	28492813	185	0
CTCF	G2	GSE9613	28509798	28510372	574	0
KLF4	hES	GSE17917	28472828	28473245	417	0
Oct1	H2O2-Hela	GSE14283	28475602	28475640	38	0
Oct1	H2O2-Hela	GSE14283	28492697	28492727	30	0
Oct1	Hela	GSE14283	28475597	28475640	43	0
Oct1	Hela	GSE14283	28492699	28492733	34	0
P300	T30-glioblastoma	GSE21026	28506170	28506707	537	0
PHF8	293T	GSE20725	28472362	28473745	1383	0
PHF8	HeLa	GSE20725	28472317	28473614	1297	0
PHF8	Hs68plusFBS	GSE20725	28472556	28473316	760	0
RNAII	Tamoxifen-MCF7	GSE14664	28481299	28481390	91	0
Rb	Senescent	GSE19898	28472631	28473176	545	0
TFAP2C	MCF7	GSE21234	28506128	28506662	534	0
p130	Senescent	GSE19898	28506320	28506475	155	0
p130	shRbQuiescent	GSE19898	28472620	28472998	378	0
p130	shRbSenescent	GSE19898	28472588	28473069	481	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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