Annotation Detail for CHRNA1
Basic Information Top
| Gene Symbol: | CHRNA1 ( ACHRA,ACHRD,CHRNA,CMS2A,FCCMS,SCCMS ) |
|---|---|
| Gene Full Name: | cholinergic receptor, nicotinic, alpha 1 (muscle) |
| Band: | 2q31.1 |
| Quick Links | Entrez ID:1134; OMIM: 100690; Uniprot ID:ACHA_HUMAN; ENSEMBL ID: ENSG00000138435; HGNC ID: 1955 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 186 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 186 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 236 | Phosphoserine(IKK) | HMM predict |
| 243 | Phosphotyrosine(Syk) | HMM predict |
| 289 | Phosphothreonine(PKC) | HMM predict |
| 311 | O-linked | HMM predict |
| 349 | Phosphoserine(PKB) | HMM predict |
| 378 | Phosphoserine | HMM predict |
| 475 | Leucine | HMM predict |
- RefSeq ID: NM_000079
- Location:chr2 175320569-175337426
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 175344646 | 175344783 | 137 | 7288 |
| CTCF | CD4 | SISSRdata | 175344646 | 175344783 | 137 | 7288 |
| CTCF | G2 | GSE9613 | 175344556 | 175344872 | 316 | 7288 |
| FoxA1 | MCF7 | MACSdata | 175337590 | 175337904 | 314 | 321 |
| Myc | hES | GSE17917 | 175339915 | 175340275 | 360 | 2669 |
| Nanog | hES | GSE18292 | 175344711 | 175345315 | 604 | 7587 |
| P300 | T30-glioblastoma | GSE21026 | 175351015 | 175352400 | 1385 | 14281 |
| TFAP2C | MCF7 | GSE21234 | 175344581 | 175345146 | 565 | 7437 |
| hScc1 | G2 | GSE9613 | 175344521 | 175344941 | 420 | 7305 |
| p130 | shRbQuiescent | GSE19898 | 175351410 | 175352209 | 799 | 14383 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 175302884 | 175303362 | 478 | 17447 |
| Nanog | hES | GSE18292 | 175303480 | 175303804 | 324 | 16928 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 175321804 | 175322127 | 323 | 0 |
| CTCF | CD4 | SISSRdata | 175321804 | 175322127 | 323 | 0 |
| CTCF | G2 | GSE9613 | 175321695 | 175322152 | 457 | 0 |
| hScc1 | Bcell | GSE12603 | 175321771 | 175322226 | 455 | 0 |
| hScc1 | CdLS | GSE12603 | 175321617 | 175322297 | 680 | 0 |
| hScc1 | G2 | GSE9613 | 175321695 | 175322226 | 531 | 0 |
Validated miRNA targets