Annotation Detail for TWF2
Basic Information Top
| Gene Symbol: | TWF2 ( A6RP,A6r,PTK9L ) |
|---|---|
| Gene Full Name: | twinfilin, actin-binding protein, homolog 2 (Drosophila) |
| Band: | 3p21.2 |
| Quick Links | Entrez ID:11344; OMIM: 607433; Uniprot ID:TWF2_HUMAN; ENSEMBL ID: ENSG00000173366,ENSG00000247596; HGNC ID: 9621 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylalanine. | |
| 14 | N6-acetyllysine. | |
| 19 | N6-acetyllysine. | |
| 309 | Phosphotyrosine. | |
| 349 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 309 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 309 | Phosphotyrosine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 93 | Phosphoserine(CDK) | HMM predict |
| 93 | Phosphoserine | HMM predict |
| 107 | Phosphothreonine(PKC) | HMM predict |
| 167 | Phosphoserine(CK2) | HMM predict |
- RefSeq ID: NM_007284
- Location:chr3 52237666-52248222
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 52247865 | 52248780 | 915 | 100 |
| H3ac | HepG2 | E | 52248517 | 52248780 | 263 | 426 |
| H3ac | HepG2 | E | 52249140 | 52250166 | 1026 | 1431 |
| Nanog | hES | GSE18292 | 52250057 | 52250320 | 263 | 1966 |
| PHF8 | HeLa | GSE20725 | 52247493 | 52249074 | 1581 | 61 |
| p130 | Senescent | GSE19898 | 52248251 | 52248705 | 454 | 256 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 52236250 | 52236889 | 639 | 1097 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 52240618 | 52240851 | 233 | 0 |
| CTCF | CD4 | SISSRdata | 52240618 | 52240851 | 233 | 0 |
| CTCF | G2 | GSE9613 | 52237418 | 52238067 | 649 | 0 |
| CTCF | G2 | GSE9613 | 52238922 | 52239256 | 334 | 0 |
| CTCF | G2 | GSE9613 | 52240450 | 52241764 | 1314 | 0 |
| CTCF | G2 | GSE9613 | 52242097 | 52242334 | 237 | 0 |
| CTCF | G2 | GSE9613 | 52243318 | 52245049 | 1731 | 0 |
| CTCF | G2 | GSE9613 | 52246118 | 52247403 | 1285 | 0 |
| ER | MCF7 | GSE19013 | 52246537 | 52247277 | 740 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 52247347 | 52247935 | 588 | 0 |
| H3ac | HepG2 | E | 52247134 | 52247865 | 731 | 0 |
| Oct1 | Hela | GSE14283 | 52246920 | 52246988 | 68 | 0 |
| Rb | Growing | GSE19898 | 52246568 | 52246772 | 204 | 0 |
| Rb | Quiescent | GSE19898 | 52246495 | 52246803 | 308 | 0 |
| Rb | Senescent | GSE19898 | 52246650 | 52246952 | 302 | 0 |
| Rb | Senescent | GSE19898 | 52247501 | 52247841 | 340 | 0 |
| hScc1 | Bcell | GSE12603 | 52241040 | 52241764 | 724 | 0 |
| hScc1 | G2 | GSE9613 | 52243432 | 52243873 | 441 | 0 |
| p130 | Quiescent | GSE19898 | 52246607 | 52246853 | 246 | 0 |
| p130 | Senescent | GSE19898 | 52246684 | 52246972 | 288 | 0 |
| p130 | Senescent | GSE19898 | 52247725 | 52248021 | 296 | 0 |
| p130 | shRbQuiescent | GSE19898 | 52247294 | 52247943 | 649 | 0 |
| p130 | shRbSenescent | GSE19898 | 52246664 | 52246824 | 160 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18147 | mRNA | chr3 | 52248319 | 52250152 | 324 | EST | PTK9L | chr3 | 52241135 | 52248643 | Non-exonic Bidirectional (NOB) pairs | |