Annotation Detail for TUBA3D
Basic Information Top
| Gene Symbol: | TUBA3D ( H2-ALPHA,TUBA3C ) |
|---|---|
| Gene Full Name: | tubulin, alpha 3d |
| Band: | 2q21.1 |
| Quick Links | Entrez ID:113457; OMIM: NA; Uniprot ID:TBA3C_HUMAN; ENSEMBL ID: ENSG00000075886; HGNC ID: 24071 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 40 | N6-acetyllysine (By similarity). | |
| 48 | Phosphoserine. | |
| 51 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|
| No data |
- RefSeq ID: NM_080386
- Location:chr2 131950163-131956973
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T30-glioblastoma | GSE21026 | 131966623 | 131967342 | 719 | 10009 |
| CTCF | G2 | GSE9613 | 131956590 | 131957513 | 923 | 78 |
| CTCF | G2 | GSE9613 | 131958314 | 131958709 | 395 | 1538 |
| CTCF | G2 | GSE9613 | 131960154 | 131960526 | 372 | 3367 |
| CTCF | G2 | GSE9613 | 131964091 | 131967311 | 3220 | 8728 |
| CTCF | G2 | GSE9613 | 131975903 | 131976167 | 264 | 19062 |
| ETS1 | Jurkat | GSE17954 | 131966301 | 131967652 | 1351 | 10003 |
| H3K4me3 | colorectal | cancer | 131967472 | 131968112 | 640 | 10819 |
| H3ac | HepG2 | E | 131964771 | 131965836 | 1065 | 8330 |
| H3ac | HepG2 | E | 131967390 | 131968112 | 722 | 10778 |
| HIF1 | Hypo | HepG2 | 131966795 | 131967242 | 447 | 10045 |
| NRSF-mono | Jurkat | QuESTdata | 131962851 | 131963214 | 363 | 6059 |
| Oct1 | H2O2-Hela | GSE14283 | 131967591 | 131967618 | 27 | 10631 |
| Oct1 | Hela | GSE14283 | 131973066 | 131973110 | 44 | 16115 |
| P300 | T30-glioblastoma | GSE21026 | 131966239 | 131967700 | 1461 | 9996 |
| PHF8 | HeLa | GSE20725 | 131965773 | 131967879 | 2106 | 9853 |
| Rb | Growing | GSE19898 | 131966623 | 131966787 | 164 | 9732 |
| Rb | Growing | GSE19898 | 131966811 | 131967221 | 410 | 10043 |
| Rb | Quiescent | GSE19898 | 131966657 | 131967236 | 579 | 9973 |
| Rb | Senescent | GSE19898 | 131966652 | 131967348 | 696 | 10027 |
| Rb | shRbQuiescent | GSE19898 | 131966831 | 131967201 | 370 | 10043 |
| Rb | shRbSenescence | GSE19898 | 131966838 | 131967288 | 450 | 10090 |
| TAF | k562 | GSE8489 | 131967472 | 131968112 | 640 | 10819 |
| TFAP2C | MCF7 | GSE21234 | 131960423 | 131961340 | 917 | 3908 |
| hScc1 | Bcell | GSE12603 | 131957834 | 131958179 | 345 | 1033 |
| hScc1 | Bcell | GSE12603 | 131965618 | 131967092 | 1474 | 9382 |
| hScc1 | G2 | GSE9613 | 131965618 | 131965986 | 368 | 8829 |
| p130 | Quiescent | GSE19898 | 131966601 | 131967272 | 671 | 9963 |
| p130 | Senescent | GSE19898 | 131966478 | 131967286 | 808 | 9909 |
| p130 | shRbQuiescent | GSE19898 | 131966689 | 131967196 | 507 | 9969 |
| p130 | shRbSenescent | GSE19898 | 131966751 | 131967239 | 488 | 10022 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 131950175 | 131950380 | 205 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15029 | mRNA | H2-ALPHA | chr2 | 132067425 | 132074236 | 6811 | EST | chr2 | 132056117 | 132083640 | Non-exonic Bidirectional (NOB) pairs | |