Annotation Detail for CHRNA3
Basic Information Top
| Gene Symbol: | CHRNA3 ( LNCR2,MGC104879,NACHRA3,PAOD2 ) |
|---|---|
| Gene Full Name: | cholinergic receptor, nicotinic, alpha 3 |
| Band: | 15q25.1 |
| Quick Links | Entrez ID:1136; OMIM: 118503; Uniprot ID:ACHA3_HUMAN; ENSEMBL ID: ENSG00000080644; HGNC ID: 1957 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 55 | N-linked (GlcNAc...) (Potential). | |
| 172 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 53 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 170 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 219 | Phosphotyrosine | Phospho.ELM 6.0 |
| 226 | Phosphotyrosine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 12 | Phosphoserine(CDC2) | HMM predict |
| 12 | Phosphoserine | HMM predict |
| 53 | N-linked | HMM predict |
| 67 | Phosphoserine(ATM) | HMM predict |
| 97 | N-linked | HMM predict |
| 101 | Phosphotyrosine(INSR) | HMM predict |
| 226 | Phosphotyrosine(EGFR) | HMM predict |
| 330 | Phosphothreonine(MAPK) | HMM predict |
| 359 | Phosphoserine(IKK) | HMM predict |
| 403 | S-palmitoyl | HMM predict |
| 416 | N-linked | HMM predict |
| 421 | Phosphoserine(PKA) | HMM predict |
| 422 | Phosphoserine(CK1) | HMM predict |
| 425 | Phosphoserine(IKK) | HMM predict |
| 425 | Phosphoserine(CK1) | HMM predict |
| 436 | Phosphoserine(MAPK) | HMM predict |
- RefSeq ID: NM_000743
- Location:chr15 76674706-76700376
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | Jurkat | GSE17954 | 76700445 | 76702213 | 1768 | 953 |
| H3K27me3 | colorectal | cancer | 76701662 | 76701897 | 235 | 1403 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 76697900 | 76698137 | 237 | 0 |
| CTCF | CD4 | SISSRdata | 76697900 | 76698137 | 237 | 0 |
| CTCF | G2 | GSE9613 | 76697684 | 76698362 | 678 | 0 |
| CTCF | G2 | GSE9613 | 76699608 | 76700348 | 740 | 0 |
| ER | MCF7 | GSE19013 | 76681495 | 76681951 | 456 | 0 |
| Oct1 | Hela | GSE14283 | 76687205 | 76687240 | 35 | 0 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 76697493 | 76697595 | 102 | 0 |
| RUNX | Jurkat | GSE17954 | 76685015 | 76685097 | 82 | 0 |
| hScc1 | Bcell | GSE12603 | 76697653 | 76698505 | 852 | 0 |
| hScc1 | Bcell | GSE12603 | 76699304 | 76700525 | 1221 | 0 |
| hScc1 | CdLS | GSE12603 | 76697653 | 76698439 | 786 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9138 | mRNA | CHRNA5 | chr15 | 76644960 | 76673513 | 198 | mRNA | CHRNA3 | chr15 | 76672449 | 76676129 | Sense/Antisense (SA) pairs |