Annotation Detail for CYGB

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Basic Information Top

Gene Symbol:	CYGB ( HGB,STAP )
Gene Full Name:	cytoglobin
Band:	17q25.1
Quick Links	Entrez ID:114757; OMIM: 608759; Uniprot ID:CYGB_HUMAN; ENSEMBL ID: ENSG00000161544; HGNC ID: 16505
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:6 results

No data

Location(AA)	Modification	Resource
61	Phosphoserine(ATM)	HMM predict
172	Valine	HMM predict
177	N-linked	HMM predict
180	Phosphothreonine(MAPK)	HMM predict
180	Phosphothreonine(CDK)	HMM predict
184	O-linked	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_134268
Location:chr17 72035034-72045376
strand:-

Upstream the gene:3 results
Downstream the gene:14 results
Inside the gene:12 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	72045654	72046029	375	465
hScc1	Bcell	GSE12603	72044928	72046101	1173	138
hScc1	CdLS	GSE12603	72045521	72046029	508	399

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	72030741	72031173	432	4078
CTCF	CD4	SISSRdata	72030741	72031173	432	4078
CTCF	Hela	GSE12889	72030720	72031134	414	4108
CTCF	Jurkat	GSE12889	72030659	72031099	440	4156
CTCF	G2	GSE9613	72027910	72028423	513	6868
CTCF	G2	GSE9613	72030713	72031292	579	4032
H3ac	HepG2	E	72034258	72035016	758	398
USF1	HepG2	E	72034294	72035052	758	362
USF2	HepG2	E	72034324	72034980	656	383
hScc1	Bcell	GSE12603	72030713	72031327	614	4015
hScc1	CdLS	GSE12603	72030713	72031516	803	3920
hScc1	CdLS	GSE12603	72034324	72035052	728	347
hScc1	G2	GSE9613	72030713	72031483	770	3937
p130	Senescent	GSE19898	72023012	72023417	405	11820

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	72036560	72036885	325	0
CTCF	G2	GSE9613	72037628	72037944	316	0
CTCF	G2	GSE9613	72043750	72043937	187	0
ER	MCF7	GSE19013	72040508	72041043	535	0
Rb	Senescent	GSE19898	72035482	72035813	331	0
USF1	HepG2	E	72040513	72041082	569	0
USF2	HepG2	E	72040513	72041082	569	0
hScc1	Bcell	GSE12603	72037698	72038025	327	0
hScc1	Bcell	GSE12603	72038458	72039060	602	0
hScc1	CdLS	GSE12603	72036560	72037060	500	0
p130	Senescent	GSE19898	72037580	72037914	334	0
p130	shRbQuiescent	GSE19898	72036893	72037770	877	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
11678	mRNA		chr17	72035262	72061255	248	mRNA	CYGB	chr17	72035034	72045377	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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