AutismKB 2.0

Annotation Detail for ELFN2


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Basic Information Top
Gene Symbol:ELFN2 ( KIAA1904,LRRC62,dJ63G5.3 )
Gene Full Name: extracellular leucine-rich repeat and fibronectin type III domain containing 2
Band: 22q13.1
Quick LinksEntrez ID:114794; OMIM: NA; Uniprot ID:LRFN6_HUMAN; ENSEMBL ID: ENSG00000166897; HGNC ID: 29396
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
54N-linked (GlcNAc...) (Potential).
80N-linked (GlcNAc...) (Potential).
85N-linked (GlcNAc...) (Potential).
117N-linked (GlcNAc...) (Potential).
205N-linked (GlcNAc...) (Potential).
247N-linked (GlcNAc...) (Potential).
475Phosphoserine (By similarity).
619Phosphoserine.
Location(AA) Modifications Resource
54N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
80N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
85N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
117N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
205N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
247N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
475Phosphoserine (By similarity).Swiss-Prot 53.0
619Phosphoserine.Swiss-Prot 53.0
619PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
15S-palmitoylHMM predict
40Phosphoserine(ATM)HMM predict
46Phosphotyrosine(Abl)HMM predict
54N-linkedHMM predict
80N-linkedHMM predict
85N-linkedHMM predict
89N-linkedHMM predict
152Phosphoserine(CK1)HMM predict
205N-linkedHMM predict
209N-linkedHMM predict
247N-linkedHMM predict
256O-linkedHMM predict
256Phosphoserine(IKK)HMM predict
256O-linkedHMM predict
259Phosphothreonine(MAPK)HMM predict
259Phosphothreonine(CDK)HMM predict
288O-linkedHMM predict
290Phosphothreonine(PKC)HMM predict
290O-linkedHMM predict
291O-linkedHMM predict
319Phosphotyrosine(Jak)HMM predict
329N-linkedHMM predict
330N-linkedHMM predict
347Phosphothreonine(PKC)HMM predict
358PhosphothreonineHMM predict
371N-linkedHMM predict
390O-linkedHMM predict
391O-linkedHMM predict
392Phosphoserine(CK1)HMM predict
468O-linkedHMM predict
472Phosphoserine(IKK)HMM predict
472Phosphoserine(CAMK2)HMM predict
502Phosphotyrosine(INSR)HMM predict
530Phosphoserine(CK2)HMM predict
569Phosphoserine(ATM)HMM predict
588O-linkedHMM predict
588O-linkedHMM predict
589O-linkedHMM predict
589O-linkedHMM predict
589O-linkedHMM predict
603Phosphoserine(MAPK)HMM predict
634Phosphoserine(ATM)HMM predict
636Phosphoserine(CK1)HMM predict
672Phosphoserine(CDC2)HMM predict
684O-linkedHMM predict
703Phosphotyrosine(EGFR)HMM predict
725Phosphoserine(ATM)HMM predict
741Phosphoserine(CK1)HMM predict
741Phosphoserine(PKA)HMM predict
744Phosphoserine(IKK)HMM predict
744Phosphoserine(ATM)HMM predict
752Phosphotyrosine(Syk)HMM predict
753O-linkedHMM predict
757Phosphoserine(CK2)HMM predict
758Phosphoserine(ATM)HMM predict
761Phosphotyrosine(INSR)HMM predict
761Phosphotyrosine(SRC)HMM predict
762Phosphoserine(CK1)HMM predict
785Phosphotyrosine(Syk)HMM predict
785Phosphotyrosine(SRC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_052906
  • Location:chr22 36093946-36101524
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Rb shRbSenescenceGSE19898 36109850 36109988 138 8395
hScc1 BcellGSE12603 36104024 36105087 1063 3031
hScc1 BcellGSE12603 36110804 36111152 348 9454
hScc1 BcellGSE12603 36111806 36113184 1378 10971
hScc1 BcellGSE12603 36113643 36114414 771 12504
hScc1 BcellGSE12603 36119309 36120275 966 18268
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 36074064 36074435 371 19697
TFAP2C MCF7GSE21234 36080370 36081107 737 13208
hScc1 BcellGSE12603 36087458 36087594 136 6421
hScc1 BcellGSE12603 36092282 36092962 680 1325
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 36100633 36101475 842 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
17443 mRNA KIAA1904 chr22 36092223 36093396 908 mRNA KIAA1904 chr22 36088500 36096079Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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