AutismKB 2.0

Annotation Detail for VASN


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Basic Information Top
Gene Symbol:VASN ( SLITL2 )
Gene Full Name: vasorin
Band: 16p13.3
Quick LinksEntrez ID:114990; OMIM: 608843; Uniprot ID:VASN_HUMAN; ENSEMBL ID: ENSG00000168140; HGNC ID: 18517
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
101N-linked (GlcNAc...).
117N-linked (GlcNAc...).
273N-linked (GlcNAc...).
500N-linked (GlcNAc...) (Potential).
528N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
101N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
117N-linked (GlcNAc...).Swiss-Prot 53.0
273N-linked (GlcNAc...).Swiss-Prot 53.0
500N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
528N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
31Phosphoserine(ATM)HMM predict
84Phosphoserine(ATM)HMM predict
117N-linkedHMM predict
322Phosphoserine(CDC2)HMM predict
322Phosphoserine(MAPK)HMM predict
344Phosphotyrosine(Syk)HMM predict
352O-linkedHMM predict
354O-linkedHMM predict
357O-linkedHMM predict
360O-linkedHMM predict
381Phosphoserine(CDC2)HMM predict
387O-linkedHMM predict
387O-linkedHMM predict
391Phosphoserine(ATM)HMM predict
391Phosphoserine(IKK)HMM predict
391O-linkedHMM predict
394O-linkedHMM predict
394Phosphoserine(IKK)HMM predict
395O-linkedHMM predict
395O-linkedHMM predict
399O-linkedHMM predict
452Phosphoserine(CDC2)HMM predict
452O-linkedHMM predict
454O-linkedHMM predict
454O-linkedHMM predict
457Phosphothreonine(MAPK)HMM predict
457O-linkedHMM predict
472Phosphoserine(CDK)HMM predict
475Phosphoserine(MAPK)HMM predict
500N-linkedHMM predict
510Phosphothreonine(PKA)HMM predict
510Phosphothreonine(PKC)HMM predict
528N-linkedHMM predict
531Phosphotyrosine(SRC)HMM predict
555Phosphothreonine(CDC2)HMM predict
555Phosphothreonine(MAPK)HMM predict
665Phosphoserine(CDK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_138440
  • Location:chr16 4361849-4373529
  • strand:+
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 4361737 4362121 384 0
CTCF G2GSE9613 4365975 4366196 221 0
CTCF G2GSE9613 4366903 4367447 544 0
CTCF G2GSE9613 4370602 4372773 2171 0
ER Breast-CancerGSE22609 4370321 4371122 801 0
ER E2-MCF7GSE14664 4368737 4368772 35 0
ER MCF7GSE19013 4364579 4365338 759 0
ER MCF7GSE19013 4370219 4371005 786 0
Oct1 H2O2-HelaGSE14283 4363849 4363876 27 0
Oct1 HelaGSE14283 4367618 4367647 29 0
TFAP2C MCF7GSE21234 4364595 4365560 965 0
TFAP2C MCF7GSE21234 4366674 4367243 569 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9552 mRNA SLITL2 chr16 4361885 4373527 155 EST chr16 4373372 4373815Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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