Annotation Detail for CIRBP
Basic Information Top
| Gene Symbol: | CIRBP ( CIRP ) |
|---|---|
| Gene Full Name: | cold inducible RNA binding protein |
| Band: | 19p13.3 |
| Quick Links | Entrez ID:1153; OMIM: 602649; Uniprot ID:CIRBP_HUMAN; ENSEMBL ID: ENSG00000099622; HGNC ID: 1982 |
| Relate to Another Database: | SFARIGene; denovo-db |
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| Location(AA) | Modification | Resource |
|---|---|---|
| 27 | Phosphoserine(CK1) | HMM predict |
| 43 | Phosphothreonine(PKC) | HMM predict |
| 101 | Methylarginine | HMM predict |
| 108 | Methylarginine | HMM predict |
| 131 | Methylarginine | HMM predict |
| 141 | Phosphotyrosine(Jak) | HMM predict |
| 142 | Phosphotyrosine(Syk) | HMM predict |
| 142 | Phosphotyrosine(Jak) | HMM predict |
| 146 | Phosphoserine | HMM predict |
| 156 | Phosphoserine(CK1) | HMM predict |
| 159 | Phosphoserine(PKC) | HMM predict |
| 164 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_001280
- Location:chr19 1220346-1224168
- strand:+
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| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K4me3 | colorectal | cancer | 1221744 | 1221999 | 255 | 0 |
| H3ac | HepG2 | E | 1221146 | 1222877 | 1731 | 0 |
| VDR | GM10855-Unstim | GSE22484 | 1219543 | 1227571 | 8028 | 0 |
| VDR | GM10861-Unstim | GSE22484 | 1219428 | 1227691 | 8263 | 0 |
| p130 | Senescent | GSE19898 | 1221020 | 1221511 | 491 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12435 | mRNA | CIRBP | chr19 | 1220346 | 1224169 | 521 | EST | chr19 | 1223648 | 1224171 | Sense/Antisense (SA) pairs | |