Annotation Detail for LRRC56
Basic Information Top
| Gene Symbol: | LRRC56 ( DKFZp761L1518,FLJ00101 ) |
|---|---|
| Gene Full Name: | leucine rich repeat containing 56 |
| Band: | 11p15.5 |
| Quick Links | Entrez ID:115399; OMIM: NA; Uniprot ID:LRC56_HUMAN; ENSEMBL ID: ENSG00000161328; HGNC ID: 25430 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 14 | Phosphoserine(PKA) | HMM predict |
| 15 | Phosphothreonine(PKA) | HMM predict |
| 16 | Phosphoserine | HMM predict |
| 16 | Phosphoserine(CDC2) | HMM predict |
| 16 | Phosphoserine(PKA) | HMM predict |
| 55 | Phosphoserine(CDC2) | HMM predict |
| 101 | N-linked | HMM predict |
| 149 | N-linked | HMM predict |
| 281 | Phosphoserine(CK1) | HMM predict |
| 290 | Phosphoserine(PKA) | HMM predict |
| 318 | N-linked | HMM predict |
| 320 | Phosphoserine(CK1) | HMM predict |
| 321 | Phosphoserine(CK1) | HMM predict |
| 333 | N-linked | HMM predict |
| 365 | O-linked | HMM predict |
| 367 | Phosphoserine(IKK) | HMM predict |
| 367 | O-linked | HMM predict |
| 367 | O-linked | HMM predict |
| 368 | Phosphothreonine(CDK) | HMM predict |
| 368 | Phosphothreonine(CDC2) | HMM predict |
| 368 | O-linked | HMM predict |
| 368 | O-linked | HMM predict |
| 403 | Phosphoserine(ATM) | HMM predict |
| 429 | Phosphothreonine(CDK) | HMM predict |
| 429 | Phosphothreonine(MAPK) | HMM predict |
| 429 | Phosphothreonine(CDC2) | HMM predict |
| 432 | Phosphoserine(MAPK) | HMM predict |
| 432 | Phosphoserine(IKK) | HMM predict |
| 432 | O-linked | HMM predict |
| 432 | Phosphoserine(CDC2) | HMM predict |
| 435 | O-linked | HMM predict |
| 435 | Phosphoserine(IKK) | HMM predict |
| 441 | Phosphoserine(CK1) | HMM predict |
| 441 | O-linked | HMM predict |
| 441 | Phosphoserine(IKK) | HMM predict |
| 451 | Phosphoserine(CDC2) | HMM predict |
| 461 | O-linked | HMM predict |
| 464 | Phosphoserine(CK1) | HMM predict |
| 465 | Phosphoserine(CDC2) | HMM predict |
| 465 | Phosphoserine(ATM) | HMM predict |
| 465 | Phosphoserine | HMM predict |
| 509 | Phosphoserine(MAPK) | HMM predict |
| 535 | O-linked | HMM predict |
| 538 | Phosphoserine(CDC2) | HMM predict |
| 541 | Proline | HMM predict |
- RefSeq ID: NM_198075
- Location:chr11 527526-544912
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 526775 | 527137 | 362 | 571 |
| hScc1 | CdLS | GSE12603 | 526775 | 526993 | 218 | 643 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| NRSF | pAb | Jurkat | 527644 | 527944 | 300 | 0 |
| NRSF | pAb | Jurkat | 531346 | 532247 | 901 | 0 |
| NRSF | pAb | Jurkat | 534447 | 534877 | 430 | 0 |
| NRSF | pAb | Jurkat | 535299 | 535683 | 384 | 0 |
| TFAP2C | MCF7 | GSE21234 | 529876 | 530446 | 570 | 0 |
| hScc1 | Bcell | GSE12603 | 530748 | 531100 | 352 | 0 |
| hScc1 | Bcell | GSE12603 | 535268 | 535683 | 415 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3920 | mRNA | DKFZp761L1518 | chr11 | 527526 | 544914 | 57 | mRNA | C11orf35 | chr11 | 544857 | 550779 | Sense/Antisense (SA) pairs |