Annotation Detail for GRIN3B
Basic Information Top
| Gene Symbol: | GRIN3B ( NR3B ) |
|---|---|
| Gene Full Name: | glutamate receptor, ionotropic, N-methyl-D-aspartate 3B |
| Band: | 19p13.3 |
| Quick Links | Entrez ID:116444; OMIM: 606651; Uniprot ID:NMD3B_HUMAN; ENSEMBL ID: ENSG00000116032; HGNC ID: 16768 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 69 | N-linked (GlcNAc...) (Potential). | |
| 344 | N-linked (GlcNAc...) (Potential). | |
| 451 | N-linked (GlcNAc...) (Potential). | |
| 465 | N-linked (GlcNAc...) (Potential). | |
| 786 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 69 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 344 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 451 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 465 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 786 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 125 | Phosphothreonine(CDK) | HMM predict |
| 210 | Phosphothreonine(PKA) | HMM predict |
| 306 | O-linked | HMM predict |
| 344 | N-linked | HMM predict |
| 402 | O-linked | HMM predict |
| 451 | N-linked | HMM predict |
| 465 | N-linked | HMM predict |
| 609 | N-linked | HMM predict |
| 611 | Phosphoserine(PKB) | HMM predict |
| 633 | Phosphoserine(PKG) | HMM predict |
| 721 | Phosphoserine(IKK) | HMM predict |
| 721 | Phosphoserine(PKG) | HMM predict |
| 724 | Phosphothreonine(PKC) | HMM predict |
| 725 | Phosphothreonine(CDC2) | HMM predict |
| 725 | Phosphothreonine(MAPK) | HMM predict |
| 867 | Phosphoserine(PKG) | HMM predict |
| 891 | Phosphoserine(CK1) | HMM predict |
| 901 | O-linked | HMM predict |
| 975 | O-linked | HMM predict |
| 1036 | O-linked | HMM predict |
- RefSeq ID: NM_138690
- Location:chr19 951436-960722
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K27me3 | colorectal | cancer | 949691 | 950757 | 1066 | 1213 |
| hScc1 | Bcell | GSE12603 | 951111 | 951695 | 584 | 34 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 952596 | 952930 | 334 | 0 |
| CTCF | CD4 | SISSRdata | 952596 | 952930 | 334 | 0 |
| CTCF | G2 | GSE9613 | 957944 | 958629 | 685 | 0 |
| KLF4 | hES | GSE17917 | 959798 | 959964 | 166 | 0 |
| TFAP2C | MCF7 | GSE21234 | 952452 | 953138 | 686 | 0 |
| hScc1 | Bcell | GSE12603 | 952321 | 953010 | 689 | 0 |
| hScc1 | Bcell | GSE12603 | 954042 | 954421 | 379 | 0 |
| hScc1 | Bcell | GSE12603 | 955757 | 956336 | 579 | 0 |
| hScc1 | Bcell | GSE12603 | 959751 | 960317 | 566 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12426 | mRNA | GRIN3B | chr19 | 951417 | 960644 | 1059 | mRNA | chr19 | 957167 | 963116 | Sense/Antisense (SA) pairs | |