AutismKB 2.0

Annotation Detail for CLNK


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Basic Information Top
Gene Symbol:CLNK ( MGC35197,MIST )
Gene Full Name: cytokine-dependent hematopoietic cell linker
Band: 4p16.1
Quick LinksEntrez ID:116449; OMIM: 611434; Uniprot ID:CLNK_HUMAN; ENSEMBL ID: ENSG00000109684; HGNC ID: 17438
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
69Phosphotyrosine; by LYN (By similarity).
96Phosphotyrosine; by LYN (By similarity).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_052964
  • Location:chr4 10100936-10295586
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 10304952 10305395 443 9587
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 10093621 10093919 298 7167
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 10220593 10220801 208 0
CTCF CD4GSE12889 10148641 10148967 326 0
CTCF CD4GSE12889 10165329 10165693 364 0
CTCF CD4GSE12889 10192888 10193121 233 0
CTCF CD4GSE12889 10233474 10233701 227 0
CTCF CD4GSE12889 10282116 10282328 212 0
CTCF CD4SISSRdata 10148641 10148967 326 0
CTCF CD4SISSRdata 10165329 10165693 364 0
CTCF CD4SISSRdata 10192888 10193121 233 0
CTCF CD4SISSRdata 10233474 10233701 227 0
CTCF CD4SISSRdata 10282116 10282328 212 0
CTCF G2GSE9613 10115780 10116006 226 0
CTCF G2GSE9613 10151166 10151599 433 0
CTCF G2GSE9613 10160460 10160786 326 0
CTCF G2GSE9613 10165322 10165870 548 0
CTCF G2GSE9613 10186646 10186918 272 0
CTCF G2GSE9613 10192825 10193059 234 0
CTCF G2GSE9613 10200188 10200528 340 0
CTCF G2GSE9613 10202070 10202406 336 0
CTCF G2GSE9613 10203754 10204069 315 0
CTCF G2GSE9613 10277398 10277680 282 0
CTCF G2GSE9613 10284606 10284971 365 0
CTCF G2GSE9613 10291562 10291737 175 0
ER E2-MCF7GSE14664 10215714 10215808 94 0
Fos K562GSE19551 10106412 10106741 329 0
Nanog ESGSE20650 10106707 10107357 650 0
Nanog hESGSE18292 10165436 10165791 355 0
Nanog hESGSE18292 10184610 10184909 299 0
Nanog hESGSE18292 10192780 10193156 376 0
Oct1 H2O2-HelaGSE14283 10220275 10220316 41 0
Oct1 HelaGSE14283 10138324 10138353 29 0
Oct1 HelaGSE14283 10154958 10155008 50 0
Oct1 HelaGSE14283 10220274 10220315 41 0
Oct1 HelaGSE14283 10291039 10291069 30 0
P300 T30-glioblastomaGSE21026 10222188 10223060 872 0
P300 T30-glioblastomaGSE21026 10266455 10267359 904 0
Sox2 hESGSE18292 10165331 10165772 441 0
TAF HelaGSE8489 10250538 10250795 257 0
hScc1 BcellGSE12603 10165288 10165870 582 0
hScc1 BcellGSE12603 10192715 10193196 481 0
hScc1 BcellGSE12603 10282133 10282414 281 0
hScc1 CdLSGSE12603 10165288 10165977 689 0
hScc1 CdLSGSE12603 10192533 10193304 771 0
hScc1 G2GSE9613 10160536 10160786 250 0
hScc1 G2GSE9613 10165322 10165870 548 0
hScc1 G2GSE9613 10192715 10193233 518 0
p63 keratinocytesGSE17611 10136962 10138667 1705 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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