AutismKB 2.0

Annotation Detail for LRG1


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Basic Information Top
Gene Symbol:LRG1 ( HMFT1766,LRG )
Gene Full Name: leucine-rich alpha-2-glycoprotein 1
Band: 19p13.3
Quick LinksEntrez ID:116844; OMIM: 611289; Uniprot ID:A2GL_HUMAN; ENSEMBL ID: ENSG00000171236; HGNC ID: 29480
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
37O-linked (GalNAc...).
79N-linked (GlcNAc...) (complex).
186N-linked (GlcNAc...) (complex).
269N-linked (GlcNAc...).
325N-linked (GlcNAc...).
Location(AA) Modifications Resource
2O-linkedOGlycBase6.0
37O-linked (GalNAc...).Swiss-Prot 53.0
44N-likedOGlycBase6.0
79N-linked (GlcNAc...).Swiss-Prot 53.0
151N-likedOGlycBase6.0
186N-linked (GlcNAc...).Swiss-Prot 53.0
234N-likedOGlycBase6.0
269N-linked (GlcNAc...).Swiss-Prot 53.0
271N-likedOGlycBase6.0
290N-likedOGlycBase6.0
325N-linked (GlcNAc...).Swiss-Prot 53.0
Location(AA) Modification Resource
11Phosphoserine(CDC2)HMM predict
79N-linkedHMM predict
186N-linkedHMM predict
240Phosphotyrosine(Jak)HMM predict
269N-linkedHMM predict
270N-linkedHMM predict
323Phosphoserine(ATM)HMM predict
325N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_052972
  • Location:chr19 4488227-4491035
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NFkBII GM12878GSE19485 4490188 4491942 1754 30
NFkBII GM12892GSE19485 4490314 4491837 1523 40
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 4487609 4488351 742 248
TFAP2C MCF7GSE21234 4487738 4488195 457 261
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 4489228 4490088 860 0
NFkBII GM10847GSE19485 4490477 4491594 1117 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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