AutismKB 2.0

Annotation Detail for AGAP2


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Basic Information Top
Gene Symbol:AGAP2 ( CENTG1,FLJ16430,GGAP2,KIAA0167,PIKE )
Gene Full Name: ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
Band: 12q14.1
Quick LinksEntrez ID:116986; OMIM: 605476; Uniprot ID:AGAP2_HUMAN; ENSEMBL ID: ENSG00000135439; HGNC ID: 16921
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
149Phosphoserine (By similarity).
267Phosphoserine (By similarity).
635Phosphothreonine.
638Phosphoserine.
808Phosphoserine (By similarity).
865Phosphoserine (By similarity).
927Phosphoserine (By similarity).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014770
  • Location:chr12 56405261-56422206
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 56422201 56422439 238 114
CTCF CD4SISSRdata 56422201 56422439 238 114
CTCF G2GSE9613 56422017 56422668 651 136
hScc1 CdLSGSE12603 56422017 56422645 628 125
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 56404303 56404478 175 871
FOXA1 MCF7GSE15244 56403825 56404620 795 1039
hScc1 BcellGSE12603 56403966 56404340 374 1109
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 56405547 56408158 2611 0
CTCF G2GSE9613 56415408 56416272 864 0
CTCF G2GSE9613 56417167 56418326 1159 0
CTCF G2GSE9613 56418800 56419265 465 0
CTCF G2GSE9613 56420082 56420341 259 0
ER Fulvestrant-MCF7GSE14664 56408547 56408643 96 0
H3K27me3 colorectalcancer 56419152 56421979 2827 0
NRSF-mono JurkatQuESTdata 56407130 56408118 988 0
NRSF pAbJurkat 56405147 56405578 431 0
NRSF pAbJurkat 56417503 56418326 823 0
PHF8 HeLaGSE20725 56405853 56407869 2016 0
Rb QuiescentGSE19898 56406163 56406374 211 0
Rb QuiescentGSE19898 56406682 56406795 113 0
Rb SenescentGSE19898 56405964 56406471 507 0
Rb SenescentGSE19898 56406884 56407203 319 0
TFAP2C MCF7GSE21234 56421768 56422626 858 0
hScc1 BcellGSE12603 56406791 56407344 553 0
hScc1 BcellGSE12603 56417212 56418326 1114 0
hScc1 CdLSGSE12603 56417845 56418326 481 0
hScc1 G2GSE9613 56406095 56407611 1516 0
hScc1 G2GSE9613 56418727 56419573 846 0
p130 QuiescentGSE19898 56406419 56406645 226 0
p130 QuiescentGSE19898 56406852 56407148 296 0
p130 SenescentGSE19898 56406365 56406642 277 0
p130 SenescentGSE19898 56406889 56407218 329 0
p130 shRbSenescentGSE19898 56405928 56406629 701 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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