AutismKB 2.0

Annotation Detail for AGAP1


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Basic Information Top
Gene Symbol:AGAP1 ( CENTG2,GGAP1,KIAA1099,MGC71657 )
Gene Full Name: ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
Band: 2q37.2
Quick LinksEntrez ID:116987; OMIM: 608651; Uniprot ID:AGAP1_HUMAN; ENSEMBL ID: ENSG00000157985; HGNC ID: 16922
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
315Phosphoserine.
836Phosphothreonine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001037131
  • Location:chr2 236067474-236698852
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 236050406 236050687 281 16928
CTCF G2GSE9613 236063794 236064013 219 3571
CTCF G2GSE9613 236067020 236067629 609 150
Fos K562GSE19551 236058558 236059246 688 8573
Jun K562GSE19551 236058696 236059156 460 8549
hScc1 G2GSE9613 236063794 236064013 219 3571
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 236707057 236707609 552 8481
CTCF G2GSE9613 236709675 236710095 420 11033
CTCF G2GSE9613 236716201 236716755 554 17626
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 236233119 236234093 974 0
CBP T30-glioblastomaGSE21026 236513371 236514538 1167 0
CTCF CD4GSE12889 236319776 236319985 209 0
CTCF CD4GSE12889 236352928 236353096 168 0
CTCF CD4SISSRdata 236319776 236319985 209 0
CTCF CD4SISSRdata 236352928 236353096 168 0
CTCF HelaGSE12889 236125387 236125551 164 0
CTCF JurkatGSE12889 236352888 236353202 314 0
CTCF G2GSE9613 236068065 236069669 1604 0
CTCF G2GSE9613 236072149 236072572 423 0
CTCF G2GSE9613 236096023 236096305 282 0
CTCF G2GSE9613 236109132 236109476 344 0
CTCF G2GSE9613 236125272 236125995 723 0
CTCF G2GSE9613 236129493 236129757 264 0
CTCF G2GSE9613 236137851 236138597 746 0
CTCF G2GSE9613 236140624 236140792 168 0
CTCF G2GSE9613 236159392 236159757 365 0
CTCF G2GSE9613 236165501 236165876 375 0
CTCF G2GSE9613 236168515 236169293 778 0
CTCF G2GSE9613 236170463 236170694 231 0
CTCF G2GSE9613 236181932 236182116 184 0
CTCF G2GSE9613 236184053 236184233 180 0
CTCF G2GSE9613 236187614 236187805 191 0
CTCF G2GSE9613 236193265 236193576 311 0
CTCF G2GSE9613 236225729 236225954 225 0
CTCF G2GSE9613 236232021 236232172 151 0
CTCF G2GSE9613 236242781 236244593 1812 0
CTCF G2GSE9613 236252126 236252413 287 0
CTCF G2GSE9613 236254089 236254365 276 0
CTCF G2GSE9613 236265705 236266461 756 0
CTCF G2GSE9613 236274593 236274792 199 0
CTCF G2GSE9613 236280724 236281039 315 0
CTCF G2GSE9613 236284064 236284232 168 0
CTCF G2GSE9613 236296775 236296988 213 0
CTCF G2GSE9613 236302493 236302903 410 0
CTCF G2GSE9613 236305030 236305275 245 0
CTCF G2GSE9613 236314121 236314542 421 0
CTCF G2GSE9613 236317631 236317953 322 0
CTCF G2GSE9613 236319801 236320411 610 0
CTCF G2GSE9613 236337188 236337550 362 0
CTCF G2GSE9613 236339038 236339921 883 0
CTCF G2GSE9613 236344641 236344871 230 0
CTCF G2GSE9613 236350116 236350423 307 0
CTCF G2GSE9613 236352698 236353331 633 0
CTCF G2GSE9613 236360832 236361010 178 0
CTCF G2GSE9613 236366183 236367054 871 0
CTCF G2GSE9613 236385557 236385772 215 0
CTCF G2GSE9613 236406164 236406485 321 0
CTCF G2GSE9613 236424332 236424680 348 0
CTCF G2GSE9613 236463835 236463972 137 0
CTCF G2GSE9613 236488114 236488395 281 0
CTCF G2GSE9613 236511412 236511771 359 0
CTCF G2GSE9613 236532987 236533475 488 0
CTCF G2GSE9613 236534604 236534945 341 0
CTCF G2GSE9613 236535960 236536412 452 0
CTCF G2GSE9613 236538460 236538888 428 0
CTCF G2GSE9613 236540318 236540626 308 0
CTCF G2GSE9613 236562913 236563132 219 0
CTCF G2GSE9613 236574240 236574912 672 0
CTCF G2GSE9613 236599451 236599802 351 0
CTCF G2GSE9613 236615253 236615525 272 0
CTCF G2GSE9613 236618723 236619741 1018 0
CTCF G2GSE9613 236620536 236620882 346 0
CTCF G2GSE9613 236635304 236635559 255 0
CTCF G2GSE9613 236676505 236676826 321 0
CTCF G2GSE9613 236678305 236678655 350 0
CTCF G2GSE9613 236679443 236679728 285 0
CTCF G2GSE9613 236685842 236686152 310 0
ER MCF7GSE19013 236409713 236410209 496 0
FOXA1 MCF7GSE15244 236079984 236080806 822 0
FOXA1 MCF7GSE15244 236621303 236622669 1366 0
FOXA1 MCF7GSE15244 236690935 236691734 799 0
Fos K562GSE19551 236513688 236514204 516 0
FoxA1 MCF7MACSdata 236621316 236621791 475 0
FoxA1 MCF7MACSdata 236691309 236691679 370 0
Gata2 K562GSE18868 236646654 236647376 722 0
H3ac HepG2E 236068809 236070334 1525 0
H3ac HepG2E 236077641 236078062 421 0
KLF4 hESGSE17917 236432765 236432921 156 0
KLF4 hESGSE17917 236573955 236574114 159 0
KLF4 hESGSE17917 236607741 236608175 434 0
Myc K562GSE19551 236646639 236647156 517 0
Myc hESGSE17917 236581898 236582113 215 0
NRSF JurkatGSE13047 236424359 236424814 455 0
NRSF JurkatGSE13047 236529118 236529487 369 0
NRSF JurkatSISSRdata 236179185 236179328 143 0
NRSF-mono JurkatQuESTdata 236424436 236424807 371 0
NRSF-mono JurkatQuESTdata 236529123 236529486 363 0
Nanog hESGSE18292 236152575 236152914 339 0
Nanog hESGSE18292 236167363 236167719 356 0
Nanog hESGSE18292 236327757 236328067 310 0
Nanog hESGSE18292 236438974 236439322 348 0
Nanog hESGSE18292 236660280 236660725 445 0
P300 T0-glioblastomaGSE21026 236191195 236192145 950 0
P300 T0-glioblastomaGSE21026 236651581 236652230 649 0
P300 T30-glioblastomaGSE21026 236239358 236240300 942 0
P300 T30-glioblastomaGSE21026 236276079 236276927 848 0
P300 T30-glioblastomaGSE21026 236282526 236283352 826 0
P300 T30-glioblastomaGSE21026 236339362 236340261 899 0
P300 T30-glioblastomaGSE21026 236513317 236514537 1220 0
P300 T30-glioblastomaGSE21026 236651361 236652282 921 0
RARA MCF7GSE15244 236098502 236099730 1228 0
RARA MCF7GSE15244 236621303 236622452 1149 0
Rb shRbQuiescentGSE19898 236074486 236074701 215 0
SRF GMOGSE8489 236338239 236338752 513 0
Sox2 hESGSE18292 236167537 236167854 317 0
Sox2 hESGSE18292 236438956 236439192 236 0
Sox2 hESGSE18292 236660331 236660694 363 0
TAF HelaGSE8489 236561199 236561374 175 0
TAF k562GSE8489 236465557 236465743 186 0
TFAP2C MCF7GSE21234 236080110 236081155 1045 0
TFAP2C MCF7GSE21234 236116075 236117573 1498 0
TFAP2C MCF7GSE21234 236117726 236118291 565 0
TFAP2C MCF7GSE21234 236141193 236141748 555 0
TFAP2C MCF7GSE21234 236282413 236283059 646 0
TFAP2C MCF7GSE21234 236322880 236323206 326 0
TFAP2C MCF7GSE21234 236352866 236353343 477 0
TFAP2C MCF7GSE21234 236614159 236614744 585 0
TFAP2C MCF7GSE21234 236618766 236619363 597 0
TFAP2C MCF7GSE21234 236621251 236621822 571 0
TFAP2C MCF7GSE21234 236627451 236627997 546 0
TFAP2C MCF7GSE21234 236651653 236652170 517 0
TFAP2C MCF7GSE21234 236681569 236682059 490 0
USF1 HepG2E 236187770 236189261 1491 0
USF1 HepG2E 236581128 236582962 1834 0
hScc1 BcellGSE12603 236116439 236116841 402 0
hScc1 BcellGSE12603 236127647 236128006 359 0
hScc1 BcellGSE12603 236137851 236138493 642 0
hScc1 BcellGSE12603 236167394 236167725 331 0
hScc1 BcellGSE12603 236168693 236169016 323 0
hScc1 BcellGSE12603 236170463 236170728 265 0
hScc1 BcellGSE12603 236243079 236244880 1801 0
hScc1 BcellGSE12603 236319801 236320085 284 0
hScc1 BcellGSE12603 236339588 236339886 298 0
hScc1 BcellGSE12603 236352996 236353258 262 0
hScc1 BcellGSE12603 236381513 236381826 313 0
hScc1 BcellGSE12603 236385423 236385836 413 0
hScc1 BcellGSE12603 236418569 236418756 187 0
hScc1 BcellGSE12603 236676398 236676713 315 0
hScc1 CdLSGSE12603 236167394 236167831 437 0
hScc1 CdLSGSE12603 236352492 236353369 877 0
hScc1 G2GSE9613 236125343 236125995 652 0
hScc1 G2GSE9613 236165501 236165947 446 0
hScc1 G2GSE9613 236167394 236167795 401 0
hScc1 G2GSE9613 236168445 236169475 1030 0
hScc1 G2GSE9613 236243472 236244479 1007 0
hScc1 G2GSE9613 236254013 236254365 352 0
hScc1 G2GSE9613 236314161 236314613 452 0
hScc1 G2GSE9613 236319801 236320045 244 0
hScc1 G2GSE9613 236339220 236339956 736 0
hScc1 G2GSE9613 236352674 236353369 695 0
hScc1 G2GSE9613 236366291 236367054 763 0
p130 QuiescentGSE19898 236240020 236240180 160 0
p130 QuiescentGSE19898 236321841 236321956 115 0
p130 SenescentGSE19898 236078502 236078838 336 0
p130 shRbQuiescentGSE19898 236191370 236191715 345 0
p130 shRbQuiescentGSE19898 236233244 236233694 450 0
p130 shRbSenescentGSE19898 236215789 236216053 264 0
p63 keratinocytesGSE17611 236114093 236114946 853 0
p63 keratinocytesGSE17611 236613970 236614966 996 0
p63 keratinocytesGSE17611 236629458 236630296 838 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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