AutismKB 2.0

Annotation Detail for OLFM3


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Basic Information Top
Gene Symbol:OLFM3 ( NOE3,NOELIN3,NOELIN3_V1,NOELIN3_V2,NOELIN3_V3,NOELIN3_V4,NOELIN3_V5,NOELIN3_V6,OPTIMEDIN )
Gene Full Name: olfactomedin 3
Band: 1p21.1
Quick LinksEntrez ID:118427; OMIM: 607567; Uniprot ID:NOE3_HUMAN; ENSEMBL ID: ENSG00000118733; HGNC ID: 17990
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
33N-linked (GlcNAc...) (Potential).
95N-linked (GlcNAc...) (Potential).
140Phosphothreonine.
179N-linked (GlcNAc...) (Potential).
299N-linked (GlcNAc...) (Potential).
465N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
33N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
95N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
179N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
299N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
465N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
33N-linkedHMM predict
194SulfotyrosineHMM predict
205Phosphoserine(CK1)HMM predict
230O-linkedHMM predict
277Phosphoserine(IKK)HMM predict
299N-linkedHMM predict
305N-linkedHMM predict
424O-linkedHMM predict
426O-linkedHMM predict
427Phosphotyrosine(SRC)HMM predict
429SulfotyrosineHMM predict
465N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_058170
  • Location:chr1 102040722-102235135
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF JurkatSISSRdata 102234744 102235609 865 41
NRSF-mono JurkatQuESTdata 102234755 102235675 920 80
NRSF-poly JurkatQuESTdata 102234777 102235604 827 55
Nanog ESGSE20650 102235042 102235397 355 84
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
RARA MCF7GSE15244 102035843 102036227 384 4688
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF JurkatGSE13047 102234569 102235676 1107 0
NRSF mAbJurkat 102233665 102236521 2856 0
Nanog ESGSE20650 102145362 102145919 557 0
Oct1 H2O2-HelaGSE14283 102229855 102229886 31 0
Oct1 HelaGSE14283 102158547 102158592 45 0
RUNX JurkatGSE17954 102066161 102066216 55 0
hScc1 BcellGSE12603 102058204 102058473 269 0
hScc1 CdLSGSE12603 102058137 102058586 449 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
1196 EST chr1 102049590 102070786 21196 mRNA OLFM3 chr1 101980155 102174569 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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